Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   J4Z27_RS01515 Genome accession   NZ_CP071992
Coordinates   345722..346387 (+) Length   221 a.a.
NCBI ID   WP_002475664.1    Uniprot ID   -
Organism   Staphylococcus epidermidis strain CBPA-ST-11003     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 340722..351387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4Z27_RS01500 (J4Z27_000297) - 342079..343623 (+) 1545 WP_145368820.1 NAD(P)H-binding protein -
  J4Z27_RS01505 (J4Z27_000298) - 343746..345215 (-) 1470 WP_002458296.1 alkaline phosphatase -
  J4Z27_RS01510 (J4Z27_000299) - 345512..345691 (+) 180 WP_002458295.1 hypothetical protein -
  J4Z27_RS01515 (J4Z27_000300) braR 345722..346387 (+) 666 WP_002475664.1 response regulator transcription factor Regulator
  J4Z27_RS01520 (J4Z27_000301) braS 346393..347289 (+) 897 WP_002458293.1 sensor histidine kinase Regulator
  J4Z27_RS01525 (J4Z27_000302) - 347400..348149 (+) 750 WP_002490898.1 ABC transporter ATP-binding protein -
  J4Z27_RS01530 (J4Z27_000303) - 348151..350163 (+) 2013 WP_020363891.1 FtsX-like permease family protein -
  J4Z27_RS01535 (J4Z27_000304) - 350267..350857 (+) 591 WP_020363892.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25629.74 Da        Isoelectric Point: 5.1924

>NTDB_id=549804 J4Z27_RS01515 WP_002475664.1 345722..346387(+) (braR) [Staphylococcus epidermidis strain CBPA-ST-11003]
MKIFIVEDDLVIAESLANELSKWNYEVHVVDNFEKIMEDFRRVEPQLVLLDINLPTLNGFHWCQEIRKVSRVPIMFISSR
TDNMDQILAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSIARDEIAVKGCKLIVDEAKLSKDNEHVQLSLTELQILK
LLFQNENKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDNLIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=549804 J4Z27_RS01515 WP_002475664.1 345722..346387(+) (braR) [Staphylococcus epidermidis strain CBPA-ST-11003]
ATGAAGATTTTCATTGTAGAAGACGATTTAGTGATTGCTGAAAGTTTAGCTAATGAGCTATCTAAATGGAATTATGAGGT
TCATGTGGTTGATAATTTTGAAAAGATAATGGAAGATTTTCGCAGAGTAGAACCACAACTCGTATTATTAGATATCAATC
TACCAACCCTTAATGGCTTCCATTGGTGCCAAGAAATACGAAAAGTATCTCGTGTGCCTATTATGTTTATTAGTTCAAGA
ACAGATAATATGGATCAAATTCTGGCTATTCAAATGGGTGGCGATGATTTTATCGAGAAACCATTTAACTTGTCTTTAAC
AGTAGCTAAAATTCAGGCACTATTGCGTCGCACTTATGATTTATCAATAGCTCGTGATGAAATAGCTGTTAAAGGTTGTA
AACTAATTGTTGATGAGGCGAAGCTTAGCAAGGATAATGAACATGTTCAACTTTCCTTAACAGAGCTACAGATATTAAAA
TTGTTATTTCAAAATGAAAATAAATATGTAAGTCGTACAGCTTTAATTGAGAAATGTTGGGAGTCTGAGAATTTTATTGA
TGACAATACGCTAGCAGTAAATATGACGCGATTACGAAAAAAATTACTTTCTATCGGTGTCGATAATTTAATTGAGACAA
AGAAAAATGTAGGATACAGGGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

79.186

100

0.792