Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | J4Z26_RS03805 | Genome accession | NZ_CP071988 |
| Coordinates | 822875..823270 (+) | Length | 131 a.a. |
| NCBI ID | WP_002457121.1 | Uniprot ID | A0A7H5C5S7 |
| Organism | Staphylococcus epidermidis strain CBPA-ST-10002 isolate HPB10235 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 817875..828270
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J4Z26_RS03780 (J4Z26_000756) | - | 819294..819698 (+) | 405 | WP_002447782.1 | F0F1 ATP synthase subunit epsilon | - |
| J4Z26_RS03785 (J4Z26_000757) | - | 819847..820080 (+) | 234 | WP_002456242.1 | DUF1146 family protein | - |
| J4Z26_RS03790 (J4Z26_000758) | murA | 820190..821455 (+) | 1266 | WP_001829978.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| J4Z26_RS03795 (J4Z26_000759) | fabZ | 821489..821926 (+) | 438 | WP_001829953.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| J4Z26_RS03800 (J4Z26_000760) | - | 822244..822684 (-) | 441 | WP_001829935.1 | YwpF-like family protein | - |
| J4Z26_RS03805 (J4Z26_000761) | ssb | 822875..823270 (+) | 396 | WP_002457121.1 | single-stranded DNA-binding protein | Machinery gene |
| J4Z26_RS03810 (J4Z26_000762) | - | 823658..824317 (+) | 660 | WP_001829904.1 | transglycosylase family protein | - |
| J4Z26_RS03815 (J4Z26_000763) | tenA | 824602..825291 (+) | 690 | WP_001829894.1 | thiaminase II | - |
| J4Z26_RS03820 (J4Z26_000764) | thiD | 825284..826105 (+) | 822 | WP_001832736.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| J4Z26_RS03825 (J4Z26_000765) | thiM | 826098..826886 (+) | 789 | WP_001829971.1 | hydroxyethylthiazole kinase | - |
| J4Z26_RS03830 (J4Z26_000766) | thiE | 826892..827530 (+) | 639 | WP_002505076.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15159.02 Da Isoelectric Point: 5.2661
>NTDB_id=549773 J4Z26_RS03805 WP_002457121.1 822875..823270(+) (ssb) [Staphylococcus epidermidis strain CBPA-ST-10002 isolate HPB10235]
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
Nucleotide
Download Length: 396 bp
>NTDB_id=549773 J4Z26_RS03805 WP_002457121.1 822875..823270(+) (ssb) [Staphylococcus epidermidis strain CBPA-ST-10002 isolate HPB10235]
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATAATAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATAATAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
74.046 |
100 |
0.74 |
| ssb | Staphylococcus aureus MW2 |
73.282 |
100 |
0.733 |