Detailed information NTG0549651

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J5D27_RS01625
• Genome accession: NZ_CP071981
• Coordinates: 342037..342837 (+)
• Length: 266 a.a.
• NCBI ID: WP_209526187.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MT5111
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 337037..347837

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5D27_RS01590 (J5D27_01590)	pseH	337537..338079 (+)	543	WP_209526178.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
J5D27_RS01595 (J5D27_01595)	-	338012..338950 (-)	939	WP_209526180.1	tetraacyldisaccharide 4'-kinase	-
J5D27_RS01600 (J5D27_01600)	-	338947..339729 (-)	783	WP_209526182.1	NAD+ synthase	-
J5D27_RS01610 (J5D27_01610)	ilvC	339978..340970 (+)	993	WP_209526183.1	ketol-acid reductoisomerase	-
J5D27_RS01615 (J5D27_01615)	minD	340994..341800 (+)	807	WP_209526185.1	septum site-determining protein MinD	-
J5D27_RS01620 (J5D27_01620)	minE	341797..342030 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
J5D27_RS01625 (J5D27_01625)	dprA	342037..342837 (+)	801	WP_209526187.1	DNA-processing protein DprA	Machinery gene
J5D27_RS01630 (J5D27_01630)	dprB	342834..343238 (+)	405	WP_209526188.1	Holliday junction resolvase RuvX	Machinery gene
J5D27_RS01635 (J5D27_01635)	-	343514..344077 (+)	564	WP_209526600.1	tetratricopeptide repeat protein	-
J5D27_RS01640 (J5D27_01640)	-	344192..344530 (+)	339	WP_000699891.1	hypothetical protein	-
J5D27_RS01645 (J5D27_01645)	-	344514..345074 (+)	561	WP_209526189.1	hypothetical protein	-
J5D27_RS01650 (J5D27_01650)	-	345150..346031 (-)	882	WP_209526190.1	RluA family pseudouridine synthase	-
J5D27_RS01655 (J5D27_01655)	recJ	346031..347581 (-)	1551	WP_209526191.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29733.69 Da
• Isoelectric Point: 8.9028

>NTDB_id=549651 J5D27_RS01625 WP_209526187.1 342037..342837(+) (dprA) [Helicobacter pylori strain MT5111]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDTKLLGAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMEDEFLKYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=549651 J5D27_RS01625 WP_209526187.1 342037..342837(+) (dprA) [Helicobacter pylori strain MT5111]
ATGAAAAGCCATTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTGGGCGCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTGGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGTGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATTTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATACGAAAAGGATTTCATGCCCATTAAAG
GTTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAGAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCCTGAACGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGGAAGATGAATTTTTAAAATATTGCGCGAAAAACCCTAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCACATTGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.368	100	0.974
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.074	81.203	0.398