NTDB

Overview

Name	tsaP	Type	Machinery gene
Locus tag	J5N61_RS01025	Genome accession	NZ_CP071973
Coordinates	218448..219599 (-)	Length	383 a.a.
NCBI ID	WP_004905510.1	Uniprot ID	S7XRZ8
Organism	Acinetobacter junii strain INC8271
Function	assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 213448..224599

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5N61_RS01000 (J5N61_01000)	-	214359..214853 (-)	495	Protein_194	phospholipase D family protein	-
J5N61_RS01005 (J5N61_01005)	-	214958..215503 (-)	546	WP_004905532.1	glutathione peroxidase	-
J5N61_RS01010 (J5N61_01010)	-	215647..216309 (+)	663	Protein_196	DMT family transporter	-
J5N61_RS01015 (J5N61_01015)	-	216704..217273 (-)	570	WP_125272793.1	L-threonylcarbamoyladenylate synthase	-
J5N61_RS01020 (J5N61_01020)	dprA	217311..218438 (-)	1128	WP_075695884.1	DNA-processing protein DprA	Machinery gene
J5N61_RS01025 (J5N61_01025)	tsaP	218448..219599 (-)	1152	WP_004905510.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
J5N61_RS01030 (J5N61_01030)	def	219720..220250 (+)	531	WP_004905508.1	peptide deformylase	-
J5N61_RS01035 (J5N61_01035)	-	220272..220709 (+)	438	WP_042892177.1	DUF2946 family protein	-
J5N61_RS01040 (J5N61_01040)	-	220783..222879 (+)	2097	WP_125272748.1	TonB-dependent copper receptor	-
J5N61_RS01045 (J5N61_01045)	-	222926..223687 (-)	762	WP_075695882.1	hypothetical protein	-

Sequence

Protein

Download Length: 383 a.a. Molecular weight: 41829.95 Da Isoelectric Point: 9.0745

                                >NTDB_id=549535 J5N61_RS01025 WP_004905510.1 218448..219599(-) (tsaP) [Acinetobacter junii strain INC8271]

MKKVLNGIHSFHALGLKKQLIAVAICAGLGMTVNITHAASPNVSPPSVKAGAPHVYVVKKGDTLWDISGKFLSKPWRWPE

IWASNKHVKNPHWIYPGDRLLLCSLNGKPLIGKDEGDGCDGIIRRYTGGGTTLRPQVRIEALNNSVPVIPLAHIQQWLER

SSVLPADAIANTPYILGTADNRVLAGKGQSVYVRGQGLENGQRYGVYREGEPYIVVDEQGKKQNLGVELLQVASGVAVRN

ENDITTVELTDSYNGEVRRGDRVMLEQEAMLPTLFYPIDAKQVRDGGKVIRVLGSIGTAAKNGVVTVDRGTADGVEIGQV

FSTYQEGEIVQDPKTKEKVKLPGQYVGSLMIFKSFDRISYAYVLESELPIKVGSNIQPPRLDD

Nucleotide

Download Length: 1152 bp

                                >NTDB_id=549535 J5N61_RS01025 WP_004905510.1 218448..219599(-) (tsaP) [Acinetobacter junii strain INC8271]

ATGAAAAAGGTTTTAAACGGCATACACTCATTTCATGCCTTGGGGTTAAAAAAACAACTGATTGCTGTTGCCATCTGTGC

AGGATTAGGCATGACGGTAAATATAACGCATGCAGCAAGCCCTAATGTTAGCCCACCCTCTGTCAAAGCTGGGGCACCAC

ATGTCTATGTAGTGAAAAAAGGCGATACCCTTTGGGATATCTCAGGCAAGTTTTTAAGTAAACCATGGCGCTGGCCAGAA

ATTTGGGCAAGCAATAAACACGTTAAGAATCCTCACTGGATTTATCCAGGTGACCGCTTACTACTCTGTAGTTTGAATGG

CAAACCGTTAATCGGTAAAGATGAAGGTGACGGCTGTGACGGTATTATTCGTCGTTATACAGGTGGTGGAACAACTTTAC

GTCCGCAAGTACGTATCGAAGCATTGAACAATAGTGTGCCAGTTATTCCATTGGCTCATATTCAACAATGGTTAGAACGT

AGTTCAGTATTACCAGCGGATGCGATTGCGAATACCCCTTATATCTTAGGCACAGCTGACAATCGCGTGCTTGCAGGCAA

AGGACAAAGTGTTTACGTCCGTGGTCAAGGTCTAGAAAATGGTCAGCGTTATGGCGTTTACCGTGAAGGTGAACCTTACA

TCGTTGTTGATGAGCAAGGCAAAAAGCAAAACCTAGGTGTTGAATTACTTCAAGTCGCATCTGGTGTTGCTGTGCGCAAT

GAAAACGACATTACTACGGTTGAACTCACTGATAGCTATAACGGCGAAGTTCGTCGTGGTGATCGCGTGATGCTTGAACA

AGAGGCAATGTTGCCAACCTTGTTCTATCCTATCGATGCAAAACAAGTACGCGATGGCGGTAAAGTGATTCGTGTATTAG

GATCGATTGGTACAGCCGCAAAAAATGGTGTTGTCACTGTTGATCGTGGTACTGCTGATGGCGTTGAAATTGGTCAAGTC

TTTAGCACCTACCAAGAGGGTGAGATCGTACAAGATCCAAAAACTAAAGAGAAAGTTAAATTACCTGGACAATATGTGGG

TAGCTTGATGATCTTCAAGAGTTTTGATCGTATCAGCTATGCCTACGTTTTAGAAAGTGAACTACCAATCAAGGTCGGTT

CAAACATCCAACCACCACGCTTGGATGACTAA

Domains

Predicted by InterproScan.

LysM domain (LysM)

(56-101)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	S7XRZ8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
tsaP	Acinetobacter baumannii D1279779	72.917	100	0.731

Detailed information NTG0549535