Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LTK20_RS05025 Genome accession   NZ_CP089159
Coordinates   941471..942757 (-) Length   428 a.a.
NCBI ID   WP_000121116.1    Uniprot ID   Q5HGG9
Organism   Staphylococcus aureus strain UNC_SaCF18     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 936471..947757
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LTK20_RS05020 (LTK20_05020) - 939748..941451 (-) 1704 WP_000814103.1 proline--tRNA ligase -
  LTK20_RS05025 (LTK20_05025) eeP 941471..942757 (-) 1287 WP_000121116.1 RIP metalloprotease RseP Regulator
  LTK20_RS05030 (LTK20_05030) - 943044..943826 (-) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  LTK20_RS05035 (LTK20_05035) - 943833..944603 (-) 771 WP_000473705.1 isoprenyl transferase -
  LTK20_RS05040 (LTK20_05040) frr 944976..945530 (-) 555 WP_001280006.1 ribosome recycling factor -
  LTK20_RS05045 (LTK20_05045) pyrH 945549..946271 (-) 723 WP_000057330.1 UMP kinase -
  LTK20_RS05050 (LTK20_05050) tsf 946408..947289 (-) 882 WP_000201387.1 translation elongation factor Ts -
  LTK20_RS05055 (LTK20_05055) - 947324..947437 (-) 114 WP_001789890.1 hypothetical protein -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 48106.51 Da        Isoelectric Point: 9.5354

>NTDB_id=549344 LTK20_RS05025 WP_000121116.1 941471..942757(-) (eeP) [Staphylococcus aureus strain UNC_SaCF18]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTEKKLTKVSSETKYVLGFQPASEHTLFKPIVFGFKSFLIGSTYIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=549344 LTK20_RS05025 WP_000121116.1 941471..942757(-) (eeP) [Staphylococcus aureus strain UNC_SaCF18]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCAAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCCGGTATGAACGTTAAAATTAAACTTAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAGGATGACTTATTCATAGAAGGTATCACTGCTTATGATA
ATGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCGGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGCACGCCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGATTACAAAAAGGTGATAAGATCGTCCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACGACTGTTAAATTTGAACGTGATGGTAAAACAAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAAAAAACTGACTAAAGTAAGTTCAGAGACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACATA
CACTTTTTAAACCAATTGTATTCGGATTTAAAAGCTTTTTAATCGGTAGTACTTATATTTTTACAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCATTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTCGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGTTACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATTGCTATTGGTGCCATTTTCATGGTCGTTATAATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains


Predicted by InterProScan.

(191-265)

(9-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5HGG9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.675

100

0.4

  eeP Streptococcus thermophilus LMG 18311

39.12

100

0.395