Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   J4H94_RS19155 Genome accession   NZ_CP071899
Coordinates   4087404..4087811 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas frequens strain TPA3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4082404..4092811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4H94_RS19135 (J4H94_19135) - 4083364..4084230 (-) 867 WP_208216948.1 CheR family methyltransferase -
  J4H94_RS19140 (J4H94_19140) - 4084292..4086340 (-) 2049 WP_063540694.1 methyl-accepting chemotaxis protein -
  J4H94_RS19145 (J4H94_19145) - 4086417..4086953 (-) 537 WP_017245424.1 chemotaxis protein CheW -
  J4H94_RS19150 (J4H94_19150) pilH 4086995..4087360 (-) 366 WP_003297216.1 twitching motility response regulator PilH -
  J4H94_RS19155 (J4H94_19155) pilG 4087404..4087811 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  J4H94_RS19160 (J4H94_19160) gshB 4088047..4088997 (+) 951 WP_017245425.1 glutathione synthase -
  J4H94_RS19165 (J4H94_19165) - 4089085..4089978 (+) 894 WP_208216949.1 energy transducer TonB -
  J4H94_RS19170 (J4H94_19170) - 4090123..4090692 (+) 570 WP_017245427.1 YqgE/AlgH family protein -
  J4H94_RS19175 (J4H94_19175) ruvX 4090689..4091117 (+) 429 WP_017245428.1 Holliday junction resolvase RuvX -
  J4H94_RS19180 (J4H94_19180) pyrR 4091139..4091654 (+) 516 WP_017245429.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  J4H94_RS19185 (J4H94_19185) - 4091713..4092729 (+) 1017 WP_017245430.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=548903 J4H94_RS19155 WP_003282729.1 4087404..4087811(-) (pilG) [Stutzerimonas frequens strain TPA3]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=548903 J4H94_RS19155 WP_003282729.1 4087404..4087811(-) (pilG) [Stutzerimonas frequens strain TPA3]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGTCGCACCGCTGAAACCCTGCT
GAAGAAGGTAGGTTGCGATGTCATCACCGCTGTTGACGGTTTCGATGCGCTCGCCAAGATTGCAGATACTCATCCTCGTA
TCATCTTCGTCGATATTATGATGCCCAGGCTGGACGGCTATCAGACCTGTGCACTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTGATCATGCTGTCTTCCAAAGATGGCCTCTTCGACAAGGCGAAAGGGCGTATCGTCGGGTCCGATCAATA
CCTCACCAAGCCGTTCAGCAAAGAAGAGCTGCTAGGCGCGATCAAGGCGCACGTCCCTGATTTCGCGCCGGTGGAACAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4