Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   SPYJRS4_RS07215 Genome accession   NZ_AP012335
Coordinates   1451121..1451303 (-) Length   60 a.a.
NCBI ID   WP_047149504.1    Uniprot ID   -
Organism   Streptococcus pyogenes JRS4     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1446121..1456303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYJRS4_RS07200 (SPYJRS4_1518) - 1446381..1446842 (-) 462 WP_002988493.1 deaminase -
  SPYJRS4_RS07205 (SPYJRS4_1519) - 1446877..1447950 (-) 1074 WP_021340125.1 Xaa-Pro peptidase family protein -
  SPYJRS4_RS07210 (SPYJRS4_1520) uvrA 1448066..1450894 (-) 2829 WP_023077881.1 excinuclease ABC subunit UvrA Machinery gene
  SPYJRS4_RS07215 (SPYJRS4_1521) prx 1451121..1451303 (-) 183 WP_047149504.1 hypothetical protein Regulator
  SPYJRS4_RS07220 (SPYJRS4_1522) - 1452000..1453205 (-) 1206 WP_047149505.1 glucosaminidase domain-containing protein -
  SPYJRS4_RS07225 (SPYJRS4_1524) - 1453328..1453555 (-) 228 WP_029714020.1 phage holin -
  SPYJRS4_RS07230 (SPYJRS4_1525) - 1453552..1453824 (-) 273 WP_011017397.1 hypothetical protein -
  SPYJRS4_RS07235 (SPYJRS4_1526) - 1453836..1454474 (-) 639 WP_046735270.1 hypothetical protein -
  SPYJRS4_RS07240 (SPYJRS4_1527) - 1454477..1454905 (-) 429 WP_002988448.1 DUF1617 family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6865.91 Da        Isoelectric Point: 3.9764

>NTDB_id=54878 SPYJRS4_RS07215 WP_047149504.1 1451121..1451303(-) (prx) [Streptococcus pyogenes JRS4]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPGEPVRPWEVMTVEVAGEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=54878 SPYJRS4_RS07215 WP_047149504.1 1451121..1451303(-) (prx) [Streptococcus pyogenes JRS4]
ATGCTAACATACGACGAGTTTAAGCAAGCAATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAAA
TGGACAGATTTTTGATTATGTTTTGCCCGGTGAGCCTGTGAGACCGTGGGAGGTTATGACAGTTGAAGTAGCGGGAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS8232

71.667

100

0.717
  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583
  prx Streptococcus pyogenes MGAS315

75.61

68.333

0.517

Multiple sequence alignment