Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   JN057_RS09490 Genome accession   NZ_CP071871
Coordinates   1828556..1829176 (-) Length   206 a.a.
NCBI ID   WP_000839908.1    Uniprot ID   A0A0B7M636
Organism   Streptococcus pneumoniae strain BVJ1JL     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1823556..1834176
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JN057_RS09465 (JN057_01937) recA 1823933..1825099 (-) 1167 WP_001085463.1 recombinase RecA Machinery gene
  JN057_RS09470 (JN057_01938) cinA 1825154..1826410 (-) 1257 WP_000642709.1 competence/damage-inducible protein A Machinery gene
  JN057_RS09475 (JN057_01939) brpA 1826495..1827511 (-) 1017 WP_000239282.1 biofilm formation/cell division transcriptional regulator BrpA -
  JN057_RS09480 (JN057_01940) - 1827519..1828037 (-) 519 WP_000455540.1 GNAT family N-acetyltransferase -
  JN057_RS09485 (JN057_01941) tsaE 1828027..1828470 (-) 444 WP_000275589.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  JN057_RS09490 (JN057_01942) comM 1828556..1829176 (-) 621 WP_000839908.1 hypothetical protein Regulator
  JN057_RS09495 (JN057_01943) - 1829559..1830422 (-) 864 WP_001093620.1 helix-turn-helix domain-containing protein -
  JN057_RS09500 (JN057_01944) - 1830611..1830781 (+) 171 WP_000742182.1 PhrA family quorum-sensing system peptide -
  JN057_RS09505 (JN057_01945) - 1830926..1832941 (+) 2016 WP_000732394.1 DUF1430 domain-containing protein -
  JN057_RS09510 (JN057_01946) - 1832943..1833575 (+) 633 WP_000571420.1 ABC transporter ATP-binding protein -
  JN057_RS11720 (JN057_01947) - 1833716..1833994 (+) 279 WP_000712971.1 hypothetical protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23552.72 Da        Isoelectric Point: 10.1254

>NTDB_id=548642 JN057_RS09490 WP_000839908.1 1828556..1829176(-) (comM) [Streptococcus pneumoniae strain BVJ1JL]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=548642 JN057_RS09490 WP_000839908.1 1828556..1829176(-) (comM) [Streptococcus pneumoniae strain BVJ1JL]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACTCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTGGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATATTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B7M636

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

100

100

1
  comM Streptococcus pneumoniae R6

100

100

1
  comM Streptococcus pneumoniae TIGR4

100

100

1
  comM Streptococcus mitis NCTC 12261

38.974

94.66

0.369
  comM Streptococcus mitis SK321

38.974

94.66

0.369