Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   JN057_RS09085 Genome accession   NZ_CP071871
Coordinates   1766570..1767280 (+) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A062WVH4
Organism   Streptococcus pneumoniae strain BVJ1JL     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1761570..1772280
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JN057_RS09070 (JN057_01854) - 1762225..1762473 (-) 249 WP_000364990.1 YneF family protein -
  JN057_RS09075 (JN057_01855) treC 1762615..1764240 (-) 1626 WP_000171230.1 alpha,alpha-phosphotrehalase -
  JN057_RS09080 (JN057_01856) treP 1764418..1766385 (-) 1968 WP_000514329.1 PTS system trehalose-specific EIIBC component -
  JN057_RS09085 (JN057_01857) treR 1766570..1767280 (+) 711 WP_000760673.1 trehalose operon repressor Regulator
  JN057_RS09090 (JN057_01858) - 1767313..1768116 (-) 804 WP_000157674.1 ABC transporter ATP-binding protein -
  JN057_RS09095 - 1768129..1769006 (-) 878 Protein_1812 ABC transporter permease -
  JN057_RS09100 (JN057_01861) - 1769018..1769827 (-) 810 Protein_1813 ABC transporter substrate-binding protein -
  JN057_RS09105 (JN057_01863) amiF 1770447..1771373 (-) 927 WP_001291296.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=548632 JN057_RS09085 WP_000760673.1 1766570..1767280(+) (treR) [Streptococcus pneumoniae strain BVJ1JL]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=548632 JN057_RS09085 WP_000760673.1 1766570..1767280(+) (treR) [Streptococcus pneumoniae strain BVJ1JL]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACAGACTATCTGGATATGGAACTAATTCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A062WVH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593