Detailed information NTG0548524

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: J4N42_RS17520
• Genome accession: NZ_CP071860
• Coordinates: 705872..708445 (+)
• Length: 857 a.a.
• NCBI ID: WP_353505400.1
• Uniprot ID: -
• Organism: Vibrio sp. SCSIO 43135
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 700872..713445

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J4N42_RS17485 (J4N42_17460)	-	701081..701599 (+)	519	WP_252033871.1	NUDIX hydrolase	-
J4N42_RS17490 (J4N42_17465)	-	701720..702067 (-)	348	WP_265689047.1	DUF496 family protein	-
J4N42_RS17495 (J4N42_17470)	-	702221..702418 (+)	198	WP_252033873.1	hypothetical protein	-
J4N42_RS17500 (J4N42_17475)	-	702456..703115 (+)	660	WP_252033874.1	YceH family protein	-
J4N42_RS17505 (J4N42_17480)	-	703099..703416 (+)	318	WP_286036695.1	GIY-YIG nuclease family protein	-
J4N42_RS17510 (J4N42_17485)	-	703489..704646 (+)	1158	WP_252033875.1	conjugal transfer protein TraF	-
J4N42_RS17515 (J4N42_17490)	luxP	704778..705875 (+)	1098	WP_252033876.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
J4N42_RS17520 (J4N42_17495)	luxQ	705872..708445 (+)	2574	WP_353505400.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
J4N42_RS17525 (J4N42_17500)	-	708473..709138 (-)	666	WP_252033878.1	PilZ domain-containing protein	-
J4N42_RS17530 (J4N42_17505)	-	709294..710556 (-)	1263	WP_252033879.1	hydroxymethylglutaryl-CoA reductase	-
J4N42_RS17535 (J4N42_17510)	-	710658..710948 (-)	291	WP_252033881.1	hypothetical protein	-
J4N42_RS17540 (J4N42_17515)	-	711030..711254 (-)	225	WP_252034224.1	hypothetical protein	-

Sequence

Protein

• Length: 857 a.a.
• Molecular weight: 96412.51 Da
• Isoelectric Point: 4.8731

>NTDB_id=548524 J4N42_RS17520 WP_353505400.1 705872..708445(+) (luxQ) [Vibrio sp. SCSIO 43135]
MRFLSEKLRPKTRNLATLISRSVFVVIAALTLIVLFQNYQVSSQLISEEIKRTTKQTSSLVQGIVNFKLTSLQIQQDSYS
RNDTLVKAIRASLQGEISQFFDSVDETEPDYTPDFRYITINNQLIWDDSSYQFYGMETSALAQLSQDMTLSSNWHITQVP
SSLGARYILARKTPIVDSASGEVMATLHIGVVLNNNFGLIEALKRGSNSENVLMLVGSQVIASTLSKKDDYTQLDVINQF
AEHDNTSAYLVGETEIRINGVPTYLSVYTVQNNDSILQFKRHHYFGILTLLALMSVVAVTTRYWIQRRVTQELGSLMQYT
SDTVERRYIEPFNGSKIEEFDQIGQALELSFKRLTEQEKQFEDLFNFSLSPILVWNREGRVIKMNPAAQKYFNASKVEDP
TFHQLVEKLLPQVMMAARGATLTGLNIPLNDKVFRWNLSPIRVEHQTQHILAQGQDITSLILAEQQSETARLEAEESARV
RADFLAKMSHELRTPLNGILGVSQLLKRGLNEPEQKEHVDILCNSGEHLLAVLNDILDFSKIEQGKFNIQHTEFRLIETN
QAVEKIFSPLCDEKGISLSVQTDFEPDIILNSDQVRLNQILFNLVSNAVKFTHQGFVNVLVSLKTTDKQSQLSVVVEDSG
IGISKNKTDTIFEPFVQAESTTTREYGGSGLGLTIVNSLVDLLGGTIDVHSELGRGSRFEVVIPVDVVDCHGSKPNTAND
VNPDELFDRQLSVLLVEDNHTNAFIAKAFCEKYGMEVTWVQDGIQSIESVQKHQYDLVLMDNQLPNLGGVEATRIIKEEL
QSEVPVFACTADGMLDTKREFLAAGADYVLVKPLKEKALFDAFMYLKSHYLSDDLVE

Nucleotide

• Length: 2574 bp

>NTDB_id=548524 J4N42_RS17520 WP_353505400.1 705872..708445(+) (luxQ) [Vibrio sp. SCSIO 43135]
GTGAGATTTTTGAGCGAAAAGTTAAGGCCTAAAACGAGAAACCTAGCGACACTGATTTCAAGATCGGTGTTTGTGGTGAT
CGCGGCATTAACACTGATAGTGTTGTTTCAAAACTATCAGGTTAGCTCACAGCTTATTTCAGAAGAAATCAAACGGACAA
CCAAACAAACCTCCAGCTTAGTTCAAGGGATCGTCAACTTTAAGCTCACGTCTTTACAGATTCAGCAAGACAGTTACAGC
AGAAATGACACCTTGGTCAAAGCAATACGCGCCAGTCTTCAGGGGGAAATCAGTCAGTTCTTCGATAGTGTTGATGAAAC
GGAACCGGATTACACACCGGACTTTCGTTACATCACCATCAATAATCAGTTAATTTGGGATGACTCTAGTTACCAGTTCT
ATGGGATGGAAACGTCGGCTTTAGCGCAGCTGAGCCAAGATATGACATTGAGCAGTAACTGGCACATAACTCAGGTACCG
TCTTCTCTAGGAGCTCGCTATATTTTGGCGCGCAAGACGCCGATAGTGGATAGTGCGAGTGGTGAAGTGATGGCTACACT
ACACATCGGTGTTGTACTTAACAACAACTTTGGTTTGATTGAAGCATTAAAAAGGGGCAGTAACTCCGAAAATGTATTGA
TGCTAGTGGGTTCTCAAGTCATTGCATCAACGCTATCGAAGAAAGATGATTATACACAGCTCGATGTCATCAATCAGTTT
GCAGAGCACGACAATACGTCTGCATACTTAGTCGGAGAAACTGAAATCCGTATTAATGGTGTGCCGACGTATCTGTCTGT
ATACACTGTCCAAAATAACGACTCTATTCTACAGTTCAAGCGACACCACTATTTTGGGATATTGACGCTTTTGGCTCTCA
TGAGTGTTGTTGCTGTGACCACCCGATATTGGATTCAACGTAGAGTCACCCAAGAGTTAGGCTCGTTAATGCAGTACACT
TCAGATACGGTTGAAAGGCGTTATATTGAGCCGTTTAATGGCAGCAAGATCGAAGAGTTCGACCAAATTGGTCAAGCATT
AGAGTTGTCCTTTAAGCGCTTGACTGAACAAGAAAAGCAATTTGAAGATCTGTTTAATTTCTCTCTTTCACCAATTCTTG
TGTGGAATCGTGAAGGGCGAGTGATCAAAATGAACCCTGCGGCTCAAAAATACTTCAACGCAAGTAAAGTTGAGGACCCA
ACTTTCCATCAATTGGTTGAAAAGCTACTTCCTCAAGTCATGATGGCTGCACGTGGTGCGACGCTGACTGGCCTCAATAT
TCCTTTAAATGACAAAGTCTTTCGATGGAATTTGTCGCCAATTAGAGTTGAACATCAAACACAGCACATTCTGGCTCAGG
GACAAGACATCACGTCACTTATCCTCGCTGAACAGCAAAGTGAGACTGCTCGATTAGAAGCGGAAGAATCGGCTCGCGTT
AGGGCTGATTTCTTGGCTAAGATGAGCCATGAACTTCGCACACCGCTTAATGGTATTTTAGGTGTCTCCCAGTTACTTAA
ACGTGGGTTGAATGAGCCTGAACAGAAAGAACACGTGGACATACTTTGCAATAGTGGCGAGCACCTATTGGCGGTACTGA
ACGATATTCTCGATTTTTCTAAAATAGAGCAAGGTAAGTTCAATATTCAACACACTGAATTTCGTTTAATTGAAACGAAC
CAAGCGGTCGAAAAAATATTCTCTCCACTTTGTGACGAAAAGGGGATCTCCTTGTCGGTTCAAACAGACTTTGAGCCAGA
CATTATCCTCAACAGCGATCAGGTTCGTCTCAACCAAATCTTGTTCAATTTGGTAAGTAACGCGGTGAAGTTCACTCACC
AAGGCTTTGTTAATGTGTTGGTTTCTTTAAAGACCACCGATAAACAGAGCCAGTTAAGCGTAGTAGTAGAAGATAGTGGT
ATCGGAATATCAAAGAATAAAACGGACACGATCTTTGAGCCATTTGTTCAGGCTGAATCAACAACCACGCGCGAATATGG
AGGAAGCGGCCTAGGATTGACGATAGTGAATAGTTTGGTTGACTTGCTTGGTGGTACGATCGACGTTCACAGTGAGCTGG
GCCGTGGCTCTCGCTTTGAGGTGGTGATACCAGTAGATGTCGTCGATTGTCACGGTTCTAAACCCAATACCGCCAATGAT
GTTAACCCTGATGAACTGTTCGACAGGCAGCTTAGCGTTTTGCTGGTGGAAGACAATCACACCAATGCATTTATTGCCAA
AGCATTCTGTGAGAAATATGGCATGGAGGTGACTTGGGTCCAAGATGGAATCCAGTCGATTGAAAGCGTCCAAAAACACC
AATATGACCTCGTACTGATGGACAATCAGTTGCCAAATCTTGGTGGCGTTGAAGCAACACGAATTATAAAAGAAGAGCTG
CAATCAGAAGTGCCAGTATTTGCCTGTACCGCCGATGGTATGCTCGACACTAAGCGAGAATTTCTTGCAGCGGGTGCCGA
TTATGTGTTGGTTAAACCGCTTAAAGAAAAAGCGCTATTTGACGCGTTTATGTATTTAAAATCTCATTACTTAAGCGACG
ATTTAGTCGAATAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (733-842)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (593-705)

• LuxQ, periplasmic (LuxQ-periplasm) (42-277)

• His Kinase A (phospho-acceptor) domain (HisKA) (481-545)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	49.123	99.767	0.49