Detailed information NTG0547765

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: J2887_RS17030
• Genome accession: NZ_CP071785
• Coordinates: 3719346..3720731 (+)
• Length: 461 a.a.
• NCBI ID: WP_227172280.1
• Uniprot ID: -
• Organism: Marinobacter sp. CA1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3714346..3725731

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J2887_RS17015 (J2887_16970)	-	3714892..3715728 (+)	837	WP_227172277.1	outer membrane protein assembly factor BamD	-
J2887_RS17020 (J2887_16975)	-	3715860..3717524 (-)	1665	WP_227172278.1	NAD+ synthase	-
J2887_RS17025 (J2887_16980)	-	3717607..3719262 (+)	1656	WP_227172279.1	ATP-binding protein	-
J2887_RS17030 (J2887_16985)	pilR	3719346..3720731 (+)	1386	WP_227172280.1	sigma-54-dependent transcriptional regulator	Regulator
J2887_RS17035 (J2887_16990)	-	3720788..3721348 (+)	561	WP_227172281.1	GspH/FimT family pseudopilin	-
J2887_RS17040 (J2887_16995)	-	3721375..3721845 (-)	471	WP_324197224.1	type IV pilin protein	-
J2887_RS17050 (J2887_17000)	-	3721861..3725508 (-)	3648	WP_227172282.1	pilus assembly protein	-

Sequence

Protein

• Length: 461 a.a.
• Molecular weight: 50915.92 Da
• Isoelectric Point: 4.8906

>NTDB_id=547765 J2887_RS17030 WP_227172280.1 3719346..3720731(+) (pilR) [Marinobacter sp. CA1]
MTNQTALIVDDEPDIRELLEITLSRMGITTWTAENVTSARALLEQHQPQLCLTDMNLPDGDGIELVRWIQQHSPCTPVAV
ITAYGSMDTAIEALKAGAFDFVSKPVELPRLRDLVNSALKLSSSAPAEESSQDDPGLILGQSQRIQRLRSQVRKLARSQA
PVFISGESGSGKELVARMIHLQGPRSEGPFIAVNCGAIPSELMESEFFGHKKGSFTGAIDNKDGLFRSAQGGTLFLDEVA
DLPLPMQVKLLRAIQEKAVRPVGDTREVPVDIRVLSATHKNLPELVAEGSFRQDLFYRINVIELAVPPLRERAEDIELLA
RHILERIARDYECPPATLTNNAIASLQKYHFPGNVRELENILERAYTLCEDDRIDAPDLHFGNGAEAPAFQPHSASQDTE
TPTAPDLPEGEMDLEGFLESVEKQAIEKALEATRWNKTAAAKRLGISFRALRYKLKKLGMD

Nucleotide

• Length: 1386 bp

>NTDB_id=547765 J2887_RS17030 WP_227172280.1 3719346..3720731(+) (pilR) [Marinobacter sp. CA1]
ATGACCAATCAGACGGCCCTTATCGTCGACGACGAACCGGATATTCGCGAACTGCTGGAAATCACCCTGTCCCGCATGGG
GATCACTACCTGGACCGCCGAAAATGTGACCTCGGCGAGGGCGTTGCTGGAGCAACACCAGCCCCAACTCTGTCTGACCG
ACATGAATCTGCCAGACGGCGACGGTATCGAATTGGTGCGCTGGATTCAGCAACACTCTCCCTGCACCCCCGTTGCCGTC
ATCACCGCCTACGGCAGCATGGACACTGCCATCGAAGCGCTCAAGGCTGGCGCCTTTGATTTCGTCTCCAAGCCGGTGGA
ACTGCCCCGGTTGCGCGACCTGGTGAACAGCGCCCTCAAACTCTCGTCCTCGGCACCAGCCGAGGAATCCAGCCAGGACG
ACCCGGGCCTGATCCTCGGGCAGTCGCAACGCATCCAGCGACTGCGAAGCCAGGTCCGCAAGCTTGCCCGCAGCCAGGCA
CCGGTGTTCATCAGCGGTGAATCCGGCAGCGGTAAGGAGCTGGTGGCCCGCATGATTCACCTGCAAGGGCCTCGCAGCGA
AGGCCCCTTCATTGCGGTGAACTGTGGCGCCATTCCCTCGGAGCTGATGGAGAGTGAGTTCTTCGGTCACAAGAAAGGCA
GCTTCACTGGCGCCATCGACAACAAGGATGGCCTGTTCCGTTCTGCCCAGGGTGGCACGCTTTTTCTGGATGAAGTCGCA
GACCTGCCCCTGCCCATGCAGGTCAAGCTGTTGCGGGCCATTCAGGAAAAAGCGGTGCGACCAGTGGGCGATACCCGCGA
AGTGCCGGTAGATATCCGGGTGTTAAGCGCAACCCATAAAAACCTGCCGGAGCTGGTTGCCGAGGGCAGTTTCCGTCAGG
ACCTGTTCTATCGTATCAATGTGATCGAACTGGCGGTTCCGCCCCTGCGGGAACGGGCCGAAGACATCGAGTTGCTGGCA
CGGCACATCCTCGAACGTATCGCGCGGGATTATGAGTGCCCGCCGGCCACTCTGACCAATAACGCCATCGCCAGCTTGCA
GAAATACCACTTCCCCGGCAATGTCCGGGAACTGGAGAATATCCTGGAGCGGGCCTACACCCTGTGCGAAGACGATCGCA
TTGACGCACCGGACCTTCATTTCGGCAATGGCGCCGAGGCGCCGGCGTTTCAGCCGCATTCAGCGTCTCAAGACACCGAG
ACACCGACAGCCCCGGACCTGCCGGAAGGCGAGATGGATCTGGAGGGGTTCCTCGAATCTGTCGAGAAACAGGCCATCGA
AAAGGCCCTGGAAGCCACCCGCTGGAACAAGACCGCCGCGGCCAAGCGCCTGGGGATCAGTTTTCGGGCGTTGCGGTACA
AGCTTAAGAAGTTGGGGATGGATTAG

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (417-458)

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (138-304)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.991	100	0.64
pilR	Acinetobacter baumannii strain A118	54.113	100	0.542