Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   J4G46_RS13385 Genome accession   NZ_CP071771
Coordinates   2782457..2784019 (+) Length   520 a.a.
NCBI ID   WP_004975700.1    Uniprot ID   A0AB35M0P1
Organism   Acinetobacter towneri strain GX7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2777457..2789019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4G46_RS13365 (J4G46_13365) - 2777852..2779156 (+) 1305 WP_004975708.1 homoserine dehydrogenase -
  J4G46_RS13370 (J4G46_13370) thrC 2779214..2780353 (+) 1140 WP_208011992.1 threonine synthase -
  J4G46_RS13375 (J4G46_13375) - 2780474..2781565 (-) 1092 WP_131260992.1 serine hydrolase -
  J4G46_RS13380 (J4G46_13380) - 2781781..2782416 (+) 636 WP_004975702.1 response regulator -
  J4G46_RS13385 (J4G46_13385) pilS 2782457..2784019 (+) 1563 WP_004975700.1 ATP-binding protein Regulator
  J4G46_RS13390 (J4G46_13390) pilR 2784089..2785522 (+) 1434 WP_179988997.1 sigma-54 dependent transcriptional regulator Regulator
  J4G46_RS13395 (J4G46_13395) - 2785572..2786735 (-) 1164 WP_004975690.1 S41 family peptidase -
  J4G46_RS13400 (J4G46_13400) gpmI 2786760..2788307 (-) 1548 WP_208011993.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 520 a.a.        Molecular weight: 59250.69 Da        Isoelectric Point: 7.0183

>NTDB_id=547687 J4G46_RS13385 WP_004975700.1 2782457..2784019(+) (pilS) [Acinetobacter towneri strain GX7]
MPDLKQHSELNQYHLGMWYGTYRLLIAFCLLLITLLTFQQLGTQYQHPGLYLYTLVCYFIFSCLQLISYKYIPFKSTQQL
TLFFAVDIIALSSLTFASDGPNLYLSLLFAITIFAASLLLQKRKALAITLIAMIMVIYQHFVGSLLDFSSLNNIGQSALL
AFLFWVVYGSGRIAVRRFQILENLNFSQSLELNRLQNINRYILEQTEMGYLVLDENCYVVLSNPAACHLLGIHPKYAHAT
YPLYKIQPDLFDLFKFDQLQDGEKFQFESQLSHFHVHIQVQKLKVPHQTLTLLALQDGRKINQQVQQLKLAALGQLSASI
AHEIRNPLAAIVQANNLFTGSDAAQQQLLSDMISKQATRIDKIIHDTLSMVKNKQTTPVAIQLNQFLPQFIQEDLPDAAS
QIQLTLTEPLSIQFDESQFRQVLINLIRNAIRHNAAQQPIEITVYPQTTYIYIDVRDFGAGVASQDLLYLFQPFFSTEIN
GTGLGLYLSHSFCEANQAKLSYVEQEQGACFRMKCLRAIE

Nucleotide


Download         Length: 1563 bp        

>NTDB_id=547687 J4G46_RS13385 WP_004975700.1 2782457..2784019(+) (pilS) [Acinetobacter towneri strain GX7]
ATGCCAGATTTAAAACAACATTCTGAGTTAAATCAGTATCATCTTGGCATGTGGTATGGTACTTACCGACTGCTGATTGC
CTTTTGTTTGCTGCTGATTACCCTACTCACCTTTCAGCAGCTTGGCACACAATATCAGCACCCAGGTTTATATCTATACA
CCTTGGTCTGCTATTTTATTTTTAGCTGCCTGCAACTGATCAGCTATAAATATATTCCTTTTAAAAGCACGCAACAACTG
ACCCTGTTTTTTGCAGTCGATATTATCGCGCTCAGTAGCCTGACTTTTGCCAGCGATGGCCCTAATTTATATTTAAGTCT
GCTGTTTGCGATCACGATTTTTGCAGCATCACTCTTGCTGCAAAAGCGTAAAGCCTTAGCCATTACCCTCATCGCGATGA
TTATGGTGATTTACCAACACTTTGTTGGGAGTTTGCTGGACTTTTCATCGCTAAATAATATTGGTCAAAGTGCGCTATTG
GCATTTTTATTTTGGGTGGTTTATGGCAGTGGACGTATTGCAGTACGGCGTTTCCAAATTTTAGAAAATCTAAATTTTTC
GCAATCTTTGGAATTAAACCGCCTACAAAATATCAACCGTTATATTTTAGAACAAACCGAAATGGGCTATTTGGTTTTAG
ATGAAAATTGCTATGTCGTCCTCAGCAACCCTGCAGCCTGTCATCTGTTGGGGATTCATCCTAAATATGCGCACGCGACC
TATCCATTGTATAAAATTCAGCCCGATTTATTTGATCTGTTCAAATTTGATCAATTGCAAGATGGAGAAAAATTTCAATT
CGAGTCGCAACTAAGTCATTTTCATGTGCATATTCAGGTACAAAAACTCAAAGTGCCACATCAAACGCTGACTTTATTGG
CGCTGCAGGATGGACGTAAAATCAATCAGCAAGTCCAGCAACTCAAATTAGCCGCCTTAGGACAACTCTCTGCCAGTATT
GCGCACGAAATTCGCAACCCGTTGGCAGCCATTGTACAAGCCAACAATTTATTTACAGGCAGTGATGCTGCACAGCAACA
ATTGCTGTCGGACATGATCAGCAAACAAGCGACACGGATTGATAAGATTATTCACGACACGCTGAGTATGGTCAAAAATA
AACAAACCACGCCTGTCGCGATTCAGCTCAATCAATTTTTGCCACAATTCATTCAGGAAGATTTACCTGATGCAGCGAGT
CAAATTCAGCTTACACTGACCGAACCACTGAGCATCCAGTTTGATGAATCACAGTTTCGCCAAGTGCTGATTAACCTGAT
TCGTAACGCCATTCGACACAATGCTGCACAGCAGCCCATTGAGATTACGGTCTACCCGCAAACAACTTATATTTATATTG
ATGTGCGGGATTTTGGTGCAGGTGTCGCCAGTCAAGATCTCCTCTATCTGTTCCAGCCATTTTTCAGTACCGAAATCAAT
GGAACTGGTTTAGGATTGTATCTATCGCATAGTTTTTGCGAGGCGAATCAAGCCAAGCTGAGCTATGTAGAACAAGAACA
AGGCGCATGTTTCAGGATGAAATGTCTACGTGCCATTGAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(415-514)

His Kinase A (phospho-acceptor) domain (HisKA)

(312-373)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

59.604

97.115

0.579