Detailed information    

insolico Bioinformatically predicted

Overview

Name   hns   Type   Regulator
Locus tag   J4G44_RS03690 Genome accession   NZ_CP071766
Coordinates   780371..780697 (+) Length   108 a.a.
NCBI ID   WP_004975751.1    Uniprot ID   A0A2A5PGU4
Organism   Acinetobacter towneri strain GX3     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 775371..785697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4G44_RS03665 (J4G44_03665) hemC 776036..776956 (+) 921 WP_096901970.1 hydroxymethylbilane synthase -
  J4G44_RS03670 (J4G44_03670) - 776978..777757 (+) 780 WP_004975746.1 uroporphyrinogen-III synthase -
  J4G44_RS03675 (J4G44_03675) - 777754..778590 (+) 837 WP_207973862.1 hypothetical protein -
  J4G44_RS03680 (J4G44_03680) - 778591..779784 (+) 1194 WP_207973863.1 heme biosynthesis protein HemY -
  J4G44_RS03685 (J4G44_03685) - 779794..780225 (+) 432 WP_004975749.1 acyl-CoA thioesterase -
  J4G44_RS03690 (J4G44_03690) hns 780371..780697 (+) 327 WP_004975751.1 H-NS family nucleoid-associated regulatory protein Regulator
  J4G44_RS03695 (J4G44_03695) gspN 780860..781600 (+) 741 WP_096901906.1 type II secretion system protein N -
  J4G44_RS03700 (J4G44_03700) - 781600..782439 (+) 840 WP_004975757.1 type II secretion system protein N -
  J4G44_RS03705 (J4G44_03705) gspD 782500..784755 (+) 2256 WP_179994905.1 type II secretion system secretin GspD -
  J4G44_RS03710 (J4G44_03710) - 784825..785475 (+) 651 WP_207973864.1 FHA domain-containing protein -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12180.06 Da        Isoelectric Point: 9.8659

>NTDB_id=547592 J4G44_RS03690 WP_004975751.1 780371..780697(+) (hns) [Acinetobacter towneri strain GX3]
MMPDISNLSVEQLKRLQAEAEALIATKKDQAIEDAYNQILAIADNLGLSIEQILEVGESKRKKSPRKTVAPRYRSKINST
DTWTGRGKKPRWLVAELEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=547592 J4G44_RS03690 WP_004975751.1 780371..780697(+) (hns) [Acinetobacter towneri strain GX3]
ATGATGCCTGATATTAGCAATTTGTCTGTAGAACAGTTAAAGCGTTTACAAGCTGAAGCGGAAGCATTAATTGCCACGAA
AAAAGATCAAGCGATTGAAGATGCCTATAATCAAATTTTAGCGATTGCAGACAATTTGGGTTTAAGCATTGAGCAGATTT
TGGAAGTTGGCGAAAGCAAGCGTAAGAAAAGCCCACGTAAAACTGTAGCGCCACGTTATCGTAGCAAAATCAATTCTACA
GATACTTGGACTGGTCGTGGTAAAAAACCACGCTGGTTAGTCGCTGAATTAGAAAAAGGCGCAAAACTTGAAGATTTTCT
AATCTAA

Domains

Predicted by InterproScan.

H-NS histone family (Histone_HNS)

(12-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A5PGU4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

75.926

100

0.759