Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   J1899_RS07475 Genome accession   NZ_CP071709
Coordinates   1522770..1522961 (+) Length   63 a.a.
NCBI ID   WP_214478267.1    Uniprot ID   -
Organism   Cytobacillus gottheilii strain 1839     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1517770..1527961
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J1899_RS07455 (J1899_07460) - 1519211..1519402 (-) 192 WP_066447571.1 YjzD family protein -
  J1899_RS07460 (J1899_07465) - 1520015..1520755 (+) 741 WP_214478265.1 hydrolase -
  J1899_RS07465 (J1899_07470) - 1520801..1521613 (+) 813 WP_214478266.1 hypothetical protein -
  J1899_RS07470 (J1899_07475) med 1521785..1522753 (+) 969 WP_066447563.1 BMP family ABC transporter substrate-binding protein Regulator
  J1899_RS07475 (J1899_07480) comZ 1522770..1522961 (+) 192 WP_214478267.1 ComZ family protein Regulator
  J1899_RS07480 (J1899_07485) - 1523091..1523408 (-) 318 WP_214478268.1 hypothetical protein -
  J1899_RS07485 (J1899_07490) - 1523688..1524620 (+) 933 WP_066447557.1 beta-ketoacyl-ACP synthase III -
  J1899_RS07490 (J1899_07495) fabF 1524660..1525898 (+) 1239 WP_214478269.1 beta-ketoacyl-ACP synthase II -
  J1899_RS07495 (J1899_07500) - 1526094..1526822 (+) 729 WP_214478270.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7283.43 Da        Isoelectric Point: 4.0236

>NTDB_id=547192 J1899_RS07475 WP_214478267.1 1522770..1522961(+) (comZ) [Cytobacillus gottheilii strain 1839]
MQSNDKTMEFMAIAMKYLPEAKQQLEEAGVELSMEMIQPFMSLFTKVMNEAYELGKEDALKED

Nucleotide


Download         Length: 192 bp        

>NTDB_id=547192 J1899_RS07475 WP_214478267.1 1522770..1522961(+) (comZ) [Cytobacillus gottheilii strain 1839]
ATGCAATCAAATGATAAAACGATGGAATTTATGGCGATCGCAATGAAGTACTTACCGGAAGCGAAGCAGCAGCTTGAAGA
GGCTGGAGTAGAGCTTTCTATGGAAATGATTCAGCCATTTATGTCGTTATTTACAAAAGTTATGAATGAGGCGTACGAGC
TAGGAAAAGAAGATGCATTAAAAGAAGACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(5-59)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

71.186

93.651

0.667