Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   J1899_RS07470 Genome accession   NZ_CP071709
Coordinates   1521785..1522753 (+) Length   322 a.a.
NCBI ID   WP_066447563.1    Uniprot ID   -
Organism   Cytobacillus gottheilii strain 1839     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1516785..1527753
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J1899_RS07455 (J1899_07460) - 1519211..1519402 (-) 192 WP_066447571.1 YjzD family protein -
  J1899_RS07460 (J1899_07465) - 1520015..1520755 (+) 741 WP_214478265.1 hydrolase -
  J1899_RS07465 (J1899_07470) - 1520801..1521613 (+) 813 WP_214478266.1 hypothetical protein -
  J1899_RS07470 (J1899_07475) med 1521785..1522753 (+) 969 WP_066447563.1 BMP family ABC transporter substrate-binding protein Regulator
  J1899_RS07475 (J1899_07480) comZ 1522770..1522961 (+) 192 WP_214478267.1 ComZ family protein Regulator
  J1899_RS07480 (J1899_07485) - 1523091..1523408 (-) 318 WP_214478268.1 hypothetical protein -
  J1899_RS07485 (J1899_07490) - 1523688..1524620 (+) 933 WP_066447557.1 beta-ketoacyl-ACP synthase III -
  J1899_RS07490 (J1899_07495) fabF 1524660..1525898 (+) 1239 WP_214478269.1 beta-ketoacyl-ACP synthase II -
  J1899_RS07495 (J1899_07500) - 1526094..1526822 (+) 729 WP_214478270.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35701.14 Da        Isoelectric Point: 4.5497

>NTDB_id=547191 J1899_RS07470 WP_066447563.1 1521785..1522753(+) (med) [Cytobacillus gottheilii strain 1839]
MHLLFKKFGFLLLCLIFLSSCGQAMSPGTLQKAGLLVPDTVNDQVWGTKGYKGMLKIQSHYNIEVYYKEGMNSAAIVQRA
VEEFDQKGVNLIFGHGNEYAEYFNDFSEDYPHIQFVSFNGDAKNKNTTSLGFEGYAMGFFGGMVAGHMTKTNTVGVLAAF
EWQPEIKGFAEGAKFQNKDVNVKIEYVGGWDDHETANIMLGKLNNTGADVIYPAGDGYNVPIIEKIKENGQYAIGYISDQ
SDLGESTVLTSTIQHVDVLYELVADKFNNGELPSGNLSFDFQDDVISLGKFSPVVDQVFKEEMNQAINQYKSTGKLPNNE
QQ

Nucleotide


Download         Length: 969 bp        

>NTDB_id=547191 J1899_RS07470 WP_066447563.1 1521785..1522753(+) (med) [Cytobacillus gottheilii strain 1839]
ATGCATCTTTTATTCAAGAAATTCGGGTTCCTTCTTTTGTGCCTTATTTTTTTATCTTCATGCGGACAGGCTATGTCGCC
AGGAACATTGCAGAAGGCTGGTTTATTAGTGCCTGACACAGTGAACGATCAAGTATGGGGAACAAAAGGCTATAAAGGAA
TGCTAAAGATTCAATCTCATTATAATATTGAGGTTTATTATAAAGAGGGGATGAACTCTGCAGCGATCGTCCAGCGTGCA
GTAGAGGAATTTGATCAAAAAGGTGTCAACCTTATTTTTGGGCATGGAAATGAGTATGCTGAATATTTTAATGATTTTTC
CGAAGACTATCCTCATATACAGTTTGTCAGCTTTAATGGTGATGCAAAAAACAAGAATACGACAAGCCTAGGATTTGAAG
GATACGCAATGGGGTTTTTCGGTGGAATGGTCGCGGGTCATATGACAAAAACAAATACGGTTGGCGTGTTGGCGGCTTTT
GAATGGCAGCCTGAAATAAAGGGATTTGCTGAAGGCGCAAAATTCCAAAATAAAGATGTTAATGTTAAAATAGAATACGT
CGGAGGCTGGGACGATCATGAAACAGCCAATATCATGCTGGGGAAGCTAAATAATACAGGTGCGGATGTTATTTACCCTG
CTGGAGATGGCTACAATGTCCCGATAATCGAAAAAATAAAAGAAAACGGGCAATATGCGATCGGTTATATCTCGGATCAG
AGTGATCTTGGGGAATCAACGGTGTTAACAAGTACCATTCAGCATGTCGATGTCTTATATGAGCTTGTTGCTGATAAGTT
TAACAATGGAGAGCTGCCATCAGGGAATTTATCTTTTGATTTTCAAGATGATGTCATTTCATTAGGTAAGTTTAGTCCAG
TGGTGGATCAAGTTTTTAAAGAAGAAATGAACCAAGCAATCAATCAGTATAAAAGCACAGGAAAGCTGCCAAATAATGAG
CAGCAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(31-320)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

53.628

98.447

0.528