Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   J1N58_RS10315 Genome accession   NZ_CP071697
Coordinates   2168742..2170001 (-) Length   419 a.a.
NCBI ID   WP_207560341.1    Uniprot ID   -
Organism   Streptococcus suis strain 1112S     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2163742..2175001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J1N58_RS10290 (J1N58_10290) dhaS 2163932..2164477 (-) 546 WP_014736432.1 dihydroxyacetone kinase transcriptional activator DhaS -
  J1N58_RS10295 (J1N58_10295) dhaK 2164623..2165612 (+) 990 WP_024377342.1 dihydroxyacetone kinase subunit DhaK -
  J1N58_RS10300 (J1N58_10300) dhaL 2165623..2166198 (+) 576 WP_002938759.1 dihydroxyacetone kinase subunit DhaL -
  J1N58_RS10305 (J1N58_10305) dhaM 2166195..2166569 (+) 375 WP_029176161.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  J1N58_RS10310 (J1N58_10310) - 2166617..2168470 (-) 1854 WP_207560340.1 proline--tRNA ligase -
  J1N58_RS10315 (J1N58_10315) eeP 2168742..2170001 (-) 1260 WP_207560341.1 RIP metalloprotease RseP Regulator
  J1N58_RS10320 (J1N58_10320) - 2170011..2170817 (-) 807 WP_207560342.1 phosphatidate cytidylyltransferase -
  J1N58_RS10325 (J1N58_10325) - 2170827..2171582 (-) 756 WP_172061441.1 isoprenyl transferase -
  J1N58_RS10330 (J1N58_10330) yajC 2171696..2172019 (-) 324 WP_044673101.1 preprotein translocase subunit YajC -
  J1N58_RS10335 (J1N58_10335) - 2172131..2173423 (-) 1293 WP_002937782.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45005.43 Da        Isoelectric Point: 5.6830

>NTDB_id=547068 J1N58_RS10315 WP_207560341.1 2168742..2170001(-) (eeP) [Streptococcus suis strain 1112S]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSISLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGKLITNFAGPMNNFILGILIFILLFFMQGGVANPLSNAVSITEGGALQAVGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKTRHVSVTAEQVDGAYRIGISPILKTGFLDKIIGGFQQAGATAVIVVTALKNLIANF
DVKQLGGPVAIYSVSNQAAANGWVSVFNLMAMLSINIGIFNLIPIPALDGGKIVMNILEGIRRKPLKPETESYITLAGVA
IMVVLMLVVTWNDIMRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=547068 J1N58_RS10315 WP_207560341.1 2168742..2170001(-) (eeP) [Streptococcus suis strain 1112S]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTTGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCCTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTAT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGGAAGTTGATAACCAACTTTGCTGGTCCCATGAATAACTTTATTTTAGGGATTCTAATATT
TATTCTTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATTAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGTAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCAGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTTGTTGAGCATGATGGGAAAACCCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATTTCACCGATTTTGAAAACTGGTTTCCTTGATA
AGATTATTGGGGGCTTCCAGCAAGCGGGTGCGACAGCAGTTATTGTTGTAACTGCCTTGAAAAACTTGATTGCCAATTTT
GATGTTAAGCAATTGGGTGGACCTGTTGCCATTTATTCTGTCAGCAATCAGGCTGCTGCAAATGGTTGGGTTTCAGTCTT
TAACCTGATGGCTATGCTATCAATCAATATCGGTATTTTCAATCTTATCCCTATTCCAGCCTTGGATGGTGGGAAGATTG
TCATGAACATTCTAGAAGGTATTCGCAGAAAACCACTTAAACCAGAAACAGAATCCTATATCACGCTGGCAGGCGTTGCA
ATCATGGTTGTCCTCATGCTGGTCGTGACCTGGAATGATATTATGCGTGTATTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

63.333

100

0.635

  eeP Streptococcus thermophilus LMG 18311

63.333

100

0.635