Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   J3R86_RS11735 Genome accession   NZ_CP071589
Coordinates   2535612..2536277 (-) Length   221 a.a.
NCBI ID   WP_207517451.1    Uniprot ID   -
Organism   Staphylococcus simiae strain 17941E     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2530612..2541277
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J3R86_RS11715 (J3R86_11715) - 2531220..2531810 (-) 591 WP_207517448.1 DUF4064 domain-containing protein -
  J3R86_RS11720 (J3R86_11720) - 2531866..2533860 (-) 1995 WP_207572179.1 ABC transporter permease -
  J3R86_RS11725 (J3R86_11725) - 2533862..2534610 (-) 749 Protein_2267 ABC transporter ATP-binding protein -
  J3R86_RS11730 (J3R86_11730) braS 2534716..2535606 (-) 891 WP_207517450.1 sensor histidine kinase Regulator
  J3R86_RS11735 (J3R86_11735) braR 2535612..2536277 (-) 666 WP_207517451.1 response regulator transcription factor Regulator
  J3R86_RS11740 (J3R86_11740) - 2536334..2536576 (-) 243 WP_207518564.1 hypothetical protein -
  J3R86_RS11745 (J3R86_11745) - 2537090..2537191 (-) 102 WP_207517452.1 SE2200 family small protein -
  J3R86_RS11750 (J3R86_11750) - 2537313..2537768 (-) 456 WP_207517453.1 MarR family winged helix-turn-helix transcriptional regulator -
  J3R86_RS11755 (J3R86_11755) - 2538017..2538778 (-) 762 WP_207517454.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25797.93 Da        Isoelectric Point: 5.1649

>NTDB_id=546747 J3R86_RS11735 WP_207517451.1 2535612..2536277(-) (braR) [Staphylococcus simiae strain 17941E]
MKILIIEDDFVIAESLAIELEKWHYEVNIVEEFNHITEVVKDYQPQLILLDINLPSFNGFHWCQEIRKFSSVPIKFISSR
VDEMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDFSIINHQLEVKGCVLFVDEAKISYNNDSINLSLTELHILK
LLFQNEGKYVSRTTLIEKCWESENFIDDNTLAVNMTRLRKKMKAIGIDDFIKTKKNIGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=546747 J3R86_RS11735 WP_207517451.1 2535612..2536277(-) (braR) [Staphylococcus simiae strain 17941E]
ATGAAGATTTTAATAATTGAAGATGATTTTGTCATTGCTGAAAGCTTAGCGATTGAATTAGAAAAATGGCATTATGAAGT
CAACATAGTAGAAGAATTCAACCATATAACAGAAGTAGTTAAAGATTATCAACCACAATTAATTTTATTAGATATTAATC
TACCATCATTTAATGGCTTTCATTGGTGCCAAGAAATACGAAAATTTTCTAGTGTACCTATTAAATTTATTAGTTCAAGG
GTGGATGAGATGGATCAAATCATGGCTATCCAAATGGGTGGCGATGATTTTATTGAAAAACCTTTCAATTTATCACTGAC
AATAGCGAAGATTCAAGCGCTACTGCGACGTACTTATGATTTTTCAATCATCAACCATCAGCTAGAAGTTAAAGGTTGTG
TATTATTCGTTGACGAAGCAAAAATAAGTTACAACAATGATAGTATCAATTTATCATTAACTGAGTTGCATATATTAAAG
TTACTTTTTCAAAATGAAGGTAAATATGTTAGTAGAACGACACTTATCGAAAAGTGTTGGGAATCTGAAAATTTTATCGA
TGATAATACATTGGCAGTTAATATGACACGATTGCGTAAGAAAATGAAAGCTATTGGAATTGATGACTTTATAAAAACAA
AGAAAAATATTGGATATAAGGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

76.923

100

0.769