Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   J3R86_RS11730 Genome accession   NZ_CP071589
Coordinates   2534716..2535606 (-) Length   296 a.a.
NCBI ID   WP_207517450.1    Uniprot ID   -
Organism   Staphylococcus simiae strain 17941E     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2529716..2540606
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J3R86_RS11710 (J3R86_11710) - 2529828..2530958 (-) 1131 WP_207517447.1 5,10-methylene-tetrahydrofolate dehydrogenase -
  J3R86_RS11715 (J3R86_11715) - 2531220..2531810 (-) 591 WP_207517448.1 DUF4064 domain-containing protein -
  J3R86_RS11720 (J3R86_11720) - 2531866..2533860 (-) 1995 WP_207572179.1 ABC transporter permease -
  J3R86_RS11725 (J3R86_11725) - 2533862..2534610 (-) 749 Protein_2267 ABC transporter ATP-binding protein -
  J3R86_RS11730 (J3R86_11730) braS 2534716..2535606 (-) 891 WP_207517450.1 sensor histidine kinase Regulator
  J3R86_RS11735 (J3R86_11735) braR 2535612..2536277 (-) 666 WP_207517451.1 response regulator transcription factor Regulator
  J3R86_RS11740 (J3R86_11740) - 2536334..2536576 (-) 243 WP_207518564.1 hypothetical protein -
  J3R86_RS11745 (J3R86_11745) - 2537090..2537191 (-) 102 WP_207517452.1 SE2200 family small protein -
  J3R86_RS11750 (J3R86_11750) - 2537313..2537768 (-) 456 WP_207517453.1 MarR family winged helix-turn-helix transcriptional regulator -
  J3R86_RS11755 (J3R86_11755) - 2538017..2538778 (-) 762 WP_207517454.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 296 a.a.        Molecular weight: 34290.81 Da        Isoelectric Point: 6.9805

>NTDB_id=546746 J3R86_RS11730 WP_207517450.1 2534716..2535606(-) (braS) [Staphylococcus simiae strain 17941E]
MRVFLKSVTQQLVIILSILALFGLIFYLYRLPSEAYILTTSIIILLMVIYLGIKYLNFVKREDLKKRNEALEETLYQLKN
AQIEYKDNIESYFLTWVHQMKTPITAAQLLLERDDPKVINRVRQELIQIDNYTSLTLSYLKLLNEEADISLSQISVNDLV
RPIIMKYSVQFIEQQTKIHYQPCNDKVLTDIRWIAIMIEQIINNALKYARGKDIWIDFDQQEQQLHIKDNGIGISEADLP
KIFDKGYSGYNGQSQTNASGIGLFIVKNIATHTNHKVTVDSVVDVGTTFTIQFPYK

Nucleotide


Download         Length: 891 bp        

>NTDB_id=546746 J3R86_RS11730 WP_207517450.1 2534716..2535606(-) (braS) [Staphylococcus simiae strain 17941E]
ATGAGAGTTTTCTTAAAATCTGTAACACAGCAACTTGTTATTATATTGAGCATATTAGCTTTATTTGGTTTGATTTTTTA
TTTATATCGTTTACCTAGTGAAGCATATATACTCACGACAAGCATTATTATATTATTAATGGTTATTTATCTAGGTATTA
AGTATTTAAATTTTGTTAAGCGAGAAGATTTAAAAAAGCGCAATGAAGCATTGGAAGAAACCCTTTATCAATTGAAAAAT
GCACAAATCGAGTATAAAGATAATATAGAAAGTTATTTTTTAACATGGGTGCATCAAATGAAAACACCAATTACTGCGGC
ACAACTATTACTTGAGCGAGATGATCCTAAAGTTATTAATCGTGTGCGACAAGAACTTATACAAATAGATAATTATACAA
GTTTAACTTTGAGTTATTTGAAATTGTTAAATGAAGAGGCTGATATTTCACTATCACAAATATCAGTTAACGATTTAGTG
AGACCTATAATTATGAAATACTCTGTACAATTTATTGAACAACAAACAAAGATACACTATCAACCTTGTAATGACAAGGT
ATTAACTGATATCAGATGGATTGCTATTATGATTGAACAAATCATTAATAACGCATTAAAATATGCTAGAGGTAAAGATA
TTTGGATTGATTTTGATCAACAAGAACAGCAATTACATATTAAAGATAATGGTATAGGTATTAGCGAAGCAGATTTACCT
AAAATATTTGATAAAGGCTACTCTGGCTATAATGGCCAGTCGCAAACAAATGCTAGTGGCATAGGTTTGTTTATTGTCAA
AAATATTGCAACTCATACAAACCATAAAGTAACTGTTGATTCGGTTGTCGACGTAGGTACGACATTTACAATTCAATTTC
CATATAAGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(190-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

72.509

98.311

0.713