Detailed information NTG0546479

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: J3Q10_RS05795
• Genome accession: NZ_CP071579
• Coordinates: 1123847..1124806 (+)
• Length: 319 a.a.
• NCBI ID: WP_002856368.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain GB03
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1118847..1129806

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J3Q10_RS05770 (J3Q10_05770)	neuB	1119346..1120386 (+)	1041	WP_002870496.1	N-acetylneuraminate synthase	-
J3Q10_RS05775 (J3Q10_05775)	neuC	1120383..1121501 (+)	1119	WP_002911676.1	UDP-N-acetylglucosamine 2-epimerase	-
J3Q10_RS05780 (J3Q10_05780)	-	1121498..1122163 (+)	666	WP_002855897.1	acylneuraminate cytidylyltransferase family protein	-
J3Q10_RS05785 (J3Q10_05785)	-	1122151..1122984 (+)	834	WP_002855772.1	CatB-related O-acetyltransferase	-
J3Q10_RS05790 (J3Q10_05790)	waaV	1122976..1123788 (-)	813	WP_002856066.1	glycosyltransferase family 2 protein	-
J3Q10_RS05795 (J3Q10_05795)	waaF	1123847..1124806 (+)	960	WP_002856368.1	lipopolysaccharide heptosyltransferase II	Regulator
J3Q10_RS05800 (J3Q10_05800)	gmhA	1124787..1125347 (-)	561	WP_002855785.1	D-sedoheptulose 7-phosphate isomerase	-
J3Q10_RS05805 (J3Q10_05805)	rfaE1	1125344..1126729 (-)	1386	WP_002856251.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
J3Q10_RS05810 (J3Q10_05810)	rfaD	1126722..1127675 (-)	954	WP_002856483.1	ADP-glyceromanno-heptose 6-epimerase	-
J3Q10_RS05815 (J3Q10_05815)	gmhB	1127676..1128236 (-)	561	WP_002911679.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
J3Q10_RS05820 (J3Q10_05820)	-	1128318..1128620 (+)	303	WP_002852762.1	cytochrome c	-
J3Q10_RS05825 (J3Q10_05825)	ccoS	1128643..1128849 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36719.17 Da
• Isoelectric Point: 10.1941

>NTDB_id=546479 J3Q10_RS05795 WP_002856368.1 1123847..1124806(+) (waaF) [Campylobacter jejuni strain GB03]
MKIFIHLPTWLGDAVMASPALYAIKEHFKDAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTNFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=546479 J3Q10_RS05795 WP_002856368.1 1123847..1124806(+) (waaF) [Campylobacter jejuni strain GB03]
ATGAAAATTTTTATACACCTTCCAACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
CTTTAAAGATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGTTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAATTTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.611	100	0.956