Detailed information
Bioinformatically predicted
Overview
| Name | CJE0566 | Type | Regulator |
| Locus tag | J3Q17_RS02405 | Genome accession | NZ_CP071576 |
| Coordinates | 464451..465101 (-) | Length | 216 a.a. |
| NCBI ID | WP_002874366.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain R12 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 452812..482469 | 464451..465101 | within | 0 |
Gene organization within MGE regions
Location: 452812..482469
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J3Q17_RS02310 (J3Q17_02310) | - | 452812..454014 (+) | 1203 | WP_002874346.1 | site-specific integrase | - |
| J3Q17_RS02315 (J3Q17_02315) | - | 454011..454181 (-) | 171 | WP_002864902.1 | helix-turn-helix domain-containing protein | - |
| J3Q17_RS02320 (J3Q17_02320) | - | 454174..454716 (-) | 543 | WP_002801905.1 | pentapeptide repeat-containing protein | - |
| J3Q17_RS02325 (J3Q17_02325) | - | 454718..455428 (-) | 711 | WP_052789479.1 | Rha family transcriptional regulator | - |
| J3Q17_RS08630 | - | 455559..456194 (-) | 636 | WP_224385547.1 | toxin-antitoxin system HicB family antitoxin | - |
| J3Q17_RS02335 (J3Q17_02335) | - | 456205..457044 (-) | 840 | WP_002861640.1 | hypothetical protein | - |
| J3Q17_RS02340 (J3Q17_02340) | - | 457098..457850 (-) | 753 | WP_070279698.1 | DNA methyltransferase | - |
| J3Q17_RS02345 (J3Q17_02345) | - | 457853..458188 (-) | 336 | WP_002874350.1 | hypothetical protein | - |
| J3Q17_RS02350 (J3Q17_02350) | - | 458191..458631 (-) | 441 | WP_002801610.1 | YopX family protein | - |
| J3Q17_RS02355 (J3Q17_02355) | - | 458612..458890 (-) | 279 | WP_002874351.1 | hypothetical protein | - |
| J3Q17_RS02360 (J3Q17_02360) | - | 458871..459566 (-) | 696 | WP_052805131.1 | hypothetical protein | - |
| J3Q17_RS02365 (J3Q17_02365) | - | 459566..460300 (-) | 735 | WP_002874353.1 | hypothetical protein | - |
| J3Q17_RS02370 (J3Q17_02370) | - | 460302..461156 (-) | 855 | WP_002874354.1 | lambda-exonuclease family protein | - |
| J3Q17_RS02375 (J3Q17_02375) | - | 461158..461385 (-) | 228 | WP_002874355.1 | helix-turn-helix domain-containing protein | - |
| J3Q17_RS02380 (J3Q17_02380) | - | 461376..461633 (-) | 258 | WP_002865124.1 | hypothetical protein | - |
| J3Q17_RS02385 (J3Q17_02385) | - | 461624..461893 (-) | 270 | WP_002874357.1 | hypothetical protein | - |
| J3Q17_RS02390 (J3Q17_02390) | - | 462453..462725 (-) | 273 | WP_002874359.1 | hypothetical protein | - |
| J3Q17_RS02395 (J3Q17_02395) | - | 462869..463600 (+) | 732 | WP_002861653.1 | hypothetical protein | - |
| J3Q17_RS02400 (J3Q17_02400) | - | 463634..464458 (-) | 825 | WP_002874362.1 | hypothetical protein | - |
| J3Q17_RS02405 (J3Q17_02405) | CJE0566 | 464451..465101 (-) | 651 | WP_002874366.1 | DNA/RNA non-specific endonuclease | Regulator |
| J3Q17_RS02410 (J3Q17_02410) | - | 465145..465417 (-) | 273 | WP_002795981.1 | hypothetical protein | - |
| J3Q17_RS02415 (J3Q17_02415) | - | 465398..466294 (-) | 897 | WP_002874367.1 | hypothetical protein | - |
| J3Q17_RS02420 (J3Q17_02420) | - | 466334..467068 (-) | 735 | WP_002874368.1 | S24 family peptidase | - |
| J3Q17_RS08725 | - | 467180..467398 (+) | 219 | WP_002826741.1 | hypothetical protein | - |
| J3Q17_RS02425 (J3Q17_02425) | - | 467560..467925 (-) | 366 | WP_002874369.1 | hypothetical protein | - |
| J3Q17_RS02430 (J3Q17_02430) | - | 467968..468969 (+) | 1002 | WP_052805132.1 | hypothetical protein | - |
| J3Q17_RS02435 (J3Q17_02435) | - | 468980..469630 (+) | 651 | WP_002871222.1 | hypothetical protein | - |
| J3Q17_RS02440 (J3Q17_02440) | - | 469648..470028 (+) | 381 | WP_002788333.1 | hypothetical protein | - |
| J3Q17_RS02445 (J3Q17_02445) | - | 470028..470414 (+) | 387 | WP_052791614.1 | terminase small subunit | - |
| J3Q17_RS02450 (J3Q17_02450) | - | 470411..471703 (+) | 1293 | WP_002874372.1 | hypothetical protein | - |
| J3Q17_RS02455 (J3Q17_02455) | - | 471693..471965 (+) | 273 | WP_002781524.1 | hypothetical protein | - |
| J3Q17_RS02460 (J3Q17_02460) | - | 471946..473484 (+) | 1539 | WP_002826750.1 | hypothetical protein | - |
| J3Q17_RS02465 (J3Q17_02465) | - | 473477..473680 (+) | 204 | WP_000931940.1 | hypothetical protein | - |
| J3Q17_RS02470 (J3Q17_02470) | - | 473670..474317 (+) | 648 | WP_002874373.1 | hypothetical protein | - |
| J3Q17_RS02475 (J3Q17_02475) | - | 474328..474708 (+) | 381 | WP_002865493.1 | hypothetical protein | - |
| J3Q17_RS02480 (J3Q17_02480) | - | 474973..476184 (+) | 1212 | WP_002801306.1 | hypothetical protein | - |
| J3Q17_RS02485 (J3Q17_02485) | - | 476184..479885 (+) | 3702 | WP_052805133.1 | PBECR2 nuclease fold domain-containing protein | - |
| J3Q17_RS02490 (J3Q17_02490) | - | 480164..480859 (-) | 696 | WP_172670321.1 | hypothetical protein | - |
| J3Q17_RS02495 (J3Q17_02495) | - | 481010..481216 (-) | 207 | WP_002801300.1 | hypothetical protein | - |
| J3Q17_RS02500 (J3Q17_02500) | - | 481435..482469 (+) | 1035 | WP_052805134.1 | DUF5309 family protein | - |
Sequence
Protein
Download Length: 216 a.a. Molecular weight: 25465.05 Da Isoelectric Point: 10.0165
>NTDB_id=546390 J3Q17_RS02405 WP_002874366.1 464451..465101(-) (CJE0566) [Campylobacter jejuni strain R12]
MKKLIILPLLSTLALADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYIKIIKGNNFKECYKVPNYEVDNLSIKRYKFNCDG
MKKLIILPLLSTLALADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYIKIIKGNNFKECYKVPNYEVDNLSIKRYKFNCDG
Nucleotide
Download Length: 651 bp
>NTDB_id=546390 J3Q17_RS02405 WP_002874366.1 464451..465101(-) (CJE0566) [Campylobacter jejuni strain R12]
ATGAAAAAACTTATAATCTTACCATTGTTATCCACTCTAGCCTTAGCTGATTATACACAATACAAACCAAGTGAAGATTT
TGCTAAGTATTTTACTAAGCAAAACTGCTCACAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGTGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AGATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAATAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATCAAGATTATAAA
AGGTAATAATTTTAAAGAATGCTATAAAGTTCCAAATTATGAAGTCGATAATTTAAGTATAAAAAGATATAAGTTTAATT
GTGATGGATAA
ATGAAAAAACTTATAATCTTACCATTGTTATCCACTCTAGCCTTAGCTGATTATACACAATACAAACCAAGTGAAGATTT
TGCTAAGTATTTTACTAAGCAAAACTGCTCACAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGTGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AGATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAATAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATCAAGATTATAAA
AGGTAATAATTTTAAAGAATGCTATAAAGTTCCAAATTATGAAGTCGATAATTTAAGTATAAAAAGATATAAGTTTAATT
GTGATGGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE0566 | Campylobacter jejuni RM1221 |
90.698 |
99.537 |
0.903 |
| CJE1441 | Campylobacter jejuni RM1221 |
90.233 |
99.537 |
0.898 |