Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LOZ87_RS08490 Genome accession   NZ_CP087391
Coordinates   1660362..1661630 (+) Length   422 a.a.
NCBI ID   WP_007611459.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain ZF57     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1655362..1666630
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LOZ87_RS08465 (LOZ87_08465) pyrH 1656157..1656879 (+) 723 WP_003154213.1 UMP kinase -
  LOZ87_RS08470 (LOZ87_08470) frr 1656882..1657439 (+) 558 WP_003154212.1 ribosome recycling factor -
  LOZ87_RS08475 (LOZ87_08475) - 1657565..1658347 (+) 783 WP_007409795.1 isoprenyl transferase -
  LOZ87_RS08480 (LOZ87_08480) - 1658351..1659148 (+) 798 WP_007409796.1 phosphatidate cytidylyltransferase -
  LOZ87_RS08485 (LOZ87_08485) dxr 1659204..1660355 (+) 1152 WP_032871494.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  LOZ87_RS08490 (LOZ87_08490) eeP 1660362..1661630 (+) 1269 WP_007611459.1 RIP metalloprotease RseP Regulator
  LOZ87_RS08495 (LOZ87_08495) proS 1661662..1663356 (+) 1695 WP_020954007.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46540.43 Da        Isoelectric Point: 6.5185

>NTDB_id=545977 LOZ87_RS08490 WP_007611459.1 1660362..1661630(+) (eeP) [Bacillus amyloliquefaciens strain ZF57]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKDDEVEKVIINQKEKYPDALIIEVETADLEHEMKITGYEQGKEDELAGFTVSQTSFFIVDGEEVQIAPYN
RQFGSKPVWKRIKAIAAGPIMNFILAYVILVMLGFIQGVPSNQPELGKLTDNGRAAAAGLKEGDYIQSINGEKMRSWTDI
VTAVKENPGKKIDVAVKRDGKSFHISVTPEAVKDENKKTIGRFGSYAPTEKGALAAIAYGATSTVDVTKAILTNLSKLVT
GQFKLDMLSGPVGIYDMTDQVAKTGIINLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINRDKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=545977 LOZ87_RS08490 WP_007611459.1 1660362..1661630(+) (eeP) [Bacillus amyloliquefaciens strain ZF57]
ATGTTCGTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTTCCATGAGCTGGGGCATTTATTGCT
CGCCCAAAGAGCGGGAATCCTTTGCCGTGAATTTGCGATCGGCTTCGGCCCTAAAATCTTTTCATTTAAAAAGAATGAAA
CCGTGTATACGATCAGACTCCTTCCGGTCGGCGGGTTCGTCCGCATGGCCGGTGAAGACCCGGAGATGATCGAAGTCAAA
CCCGGTTATACCGTCGGGCTTCTTTTTAATAAAGATGACGAAGTGGAAAAAGTCATCATTAATCAAAAGGAAAAATATCC
CGACGCTTTAATTATCGAGGTGGAGACGGCTGATCTTGAGCACGAAATGAAGATTACCGGGTACGAGCAGGGGAAAGAAG
ATGAACTGGCGGGCTTTACTGTCAGTCAGACCTCCTTTTTTATCGTAGACGGAGAAGAAGTGCAGATTGCGCCTTACAAT
CGACAATTCGGGTCTAAACCCGTATGGAAGCGGATTAAGGCGATTGCTGCCGGTCCGATAATGAACTTCATCTTAGCGTA
TGTCATTCTCGTCATGCTTGGATTCATTCAAGGCGTGCCTTCGAATCAGCCTGAGCTCGGGAAGCTGACAGACAATGGAC
GCGCAGCGGCTGCCGGTTTAAAAGAAGGCGACTATATCCAGAGCATTAACGGGGAAAAAATGAGGTCATGGACAGACATC
GTGACAGCGGTAAAAGAAAATCCCGGAAAAAAAATCGATGTCGCCGTCAAACGGGACGGCAAATCGTTTCATATCTCGGT
TACACCTGAAGCTGTAAAAGATGAAAATAAAAAAACAATCGGCCGCTTCGGCTCTTATGCGCCGACTGAAAAAGGCGCGC
TTGCAGCGATTGCCTATGGCGCGACATCTACCGTTGATGTCACAAAAGCGATTCTGACCAATCTGAGCAAACTTGTGACA
GGCCAGTTTAAGCTTGATATGCTTTCGGGTCCTGTCGGCATTTATGACATGACGGATCAAGTTGCAAAAACCGGTATTAT
CAACCTATTCCAGTTTGCGGCGTTTTTAAGCATCAACCTGGGAATTGTCAACCTGCTGCCGATCCCGGCGCTTGACGGCG
GGCGGCTGCTGTTTTTATTCATTGAAGCAATCCGCGGCAAGCCGATAAACCGTGACAAGGAAGCATTTGTCGTATTTATC
GGCGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGTTTATTCTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_6)

(212-258)

Peptidase family M50 (Peptidase_M50)

(8-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.535

100

0.403
  eeP Streptococcus thermophilus LMG 18311

39.671

100

0.4