Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | J2N83_RS03900 | Genome accession | NZ_CP071512 |
| Coordinates | 787347..787745 (+) | Length | 132 a.a. |
| NCBI ID | WP_011275249.1 | Uniprot ID | A0A5B2YX53 |
| Organism | Staphylococcus haemolyticus strain 1b | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 782347..792745
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J2N83_RS03870 (J2N83_03870) | atpD | 782623..784035 (+) | 1413 | WP_053025288.1 | F0F1 ATP synthase subunit beta | - |
| J2N83_RS03875 (J2N83_03875) | - | 784056..784457 (+) | 402 | WP_053025287.1 | F0F1 ATP synthase subunit epsilon | - |
| J2N83_RS03880 (J2N83_03880) | - | 784585..784818 (+) | 234 | WP_011275245.1 | DUF1146 family protein | - |
| J2N83_RS03885 (J2N83_03885) | murA | 784923..786188 (+) | 1266 | WP_016931214.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| J2N83_RS03890 (J2N83_03890) | fabZ | 786228..786665 (+) | 438 | WP_016931213.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| J2N83_RS03895 (J2N83_03895) | - | 786715..787158 (-) | 444 | WP_011275248.1 | YwpF-like family protein | - |
| J2N83_RS03900 (J2N83_03900) | ssb | 787347..787745 (+) | 399 | WP_011275249.1 | single-stranded DNA-binding protein | Machinery gene |
| J2N83_RS03905 (J2N83_03905) | - | 788083..788790 (+) | 708 | WP_053025537.1 | transglycosylase family protein | - |
| J2N83_RS03910 (J2N83_03910) | tenA | 789078..789767 (+) | 690 | WP_053025535.1 | thiaminase II | - |
| J2N83_RS03915 (J2N83_03915) | thiD | 789760..790581 (+) | 822 | WP_053025534.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| J2N83_RS03920 (J2N83_03920) | thiM | 790574..791365 (+) | 792 | WP_053025532.1 | hydroxyethylthiazole kinase | - |
| J2N83_RS03925 (J2N83_03925) | thiE | 791367..792005 (+) | 639 | WP_053025530.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 15141.05 Da Isoelectric Point: 4.7942
>NTDB_id=545855 J2N83_RS03900 WP_011275249.1 787347..787745(+) (ssb) [Staphylococcus haemolyticus strain 1b]
MLNKIVIVGRLTKKAQIFENEEVKIATFCVATERNYKDENNEIACDYIFCKAFGKTATNIESYTDQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSKNDNILPNTSYDEDAYSFDHLEVIDVN
MLNKIVIVGRLTKKAQIFENEEVKIATFCVATERNYKDENNEIACDYIFCKAFGKTATNIESYTDQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSKNDNILPNTSYDEDAYSFDHLEVIDVN
Nucleotide
Download Length: 399 bp
>NTDB_id=545855 J2N83_RS03900 WP_011275249.1 787347..787745(+) (ssb) [Staphylococcus haemolyticus strain 1b]
ATGCTAAATAAAATTGTGATAGTAGGTCGATTGACCAAAAAGGCACAAATATTTGAAAACGAGGAGGTGAAGATAGCTAC
GTTCTGTGTTGCAACTGAACGTAATTATAAAGATGAAAATAATGAAATAGCTTGTGATTATATTTTTTGTAAAGCATTTG
GTAAAACAGCAACAAATATAGAATCATATACAGACCAAGGCACTTTAGTTGGTATTACAGGACAAATGAGATCTCGTAAG
TACGATAAAGATGGCCAAACGCACTTTGTGACTGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATCTAAAAA
CGATAATATTCTTCCTAACACCTCATATGATGAAGATGCTTATTCCTTTGATCACCTTGAAGTGATTGATGTTAACTAA
ATGCTAAATAAAATTGTGATAGTAGGTCGATTGACCAAAAAGGCACAAATATTTGAAAACGAGGAGGTGAAGATAGCTAC
GTTCTGTGTTGCAACTGAACGTAATTATAAAGATGAAAATAATGAAATAGCTTGTGATTATATTTTTTGTAAAGCATTTG
GTAAAACAGCAACAAATATAGAATCATATACAGACCAAGGCACTTTAGTTGGTATTACAGGACAAATGAGATCTCGTAAG
TACGATAAAGATGGCCAAACGCACTTTGTGACTGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATCTAAAAA
CGATAATATTCTTCCTAACACCTCATATGATGAAGATGCTTATTCCTTTGATCACCTTGAAGTGATTGATGTTAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
75.573 |
99.242 |
0.75 |
| ssb | Staphylococcus aureus MW2 |
74.809 |
99.242 |
0.742 |