Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   J2N82_RS01305 Genome accession   NZ_CP071505
Coordinates   274911..275579 (+) Length   222 a.a.
NCBI ID   WP_053024588.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain 12b     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 269911..280579
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J2N82_RS01280 (J2N82_01280) - 270375..271001 (-) 627 WP_207323692.1 FMN-dependent NADH-azoreductase -
  J2N82_RS01285 (J2N82_01285) - 271221..271322 (+) 102 WP_016930637.1 SE2200 family small protein -
  J2N82_RS01290 (J2N82_01290) - 271464..272399 (+) 936 WP_110708891.1 LCP family protein -
  J2N82_RS01295 (J2N82_01295) - 272489..273964 (-) 1476 WP_016930640.1 alkaline phosphatase -
  J2N82_RS01300 (J2N82_01300) - 274717..274881 (+) 165 WP_016930641.1 hypothetical protein -
  J2N82_RS01305 (J2N82_01305) braR 274911..275579 (+) 669 WP_053024588.1 response regulator transcription factor Regulator
  J2N82_RS01310 (J2N82_01310) braS 275582..276478 (+) 897 WP_053024587.1 sensor histidine kinase Regulator
  J2N82_RS01315 (J2N82_01315) - 276653..277402 (+) 750 WP_053024586.1 ABC transporter ATP-binding protein -
  J2N82_RS01320 (J2N82_01320) - 277404..279395 (+) 1992 WP_207323693.1 FtsX-like permease family protein -
  J2N82_RS01325 (J2N82_01325) - 279485..280291 (+) 807 WP_207323694.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25723.56 Da        Isoelectric Point: 4.6536

>NTDB_id=545784 J2N82_RS01305 WP_053024588.1 274911..275579(+) (braR) [Staphylococcus haemolyticus strain 12b]
MKVFIVEDDFIIAESLEQELSKWNYEVIVAKQFDNIIDVFHANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEITVKNCKLVVDEATLYHEDESVQLSFTELQILN
MLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVIDLIETKKNVGYKVS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=545784 J2N82_RS01305 WP_053024588.1 274911..275579(+) (braR) [Staphylococcus haemolyticus strain 12b]
ATGAAAGTATTCATCGTGGAAGATGATTTTATCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTATCGACGTATTTCATGCAAATCAACCGCAACTCGTATTGCTCGATATCAATC
TACCGACATTCAATGGCTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTACCGATTATGTTTATTAGTTCAAGA
ACCGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGCGATGACTTTATCGAGAAACCATTTAATTTATCGTTAAC
TGTAACTAAGATTCAAGCATTATTACGTAGAACGTATGATTTAGCAGTGTCTAATAATGAAATTACTGTTAAAAATTGCA
AACTTGTTGTAGATGAAGCAACACTTTACCATGAAGACGAATCGGTTCAATTGTCCTTTACTGAATTACAAATCTTAAAT
ATGTTGTTCCGCAATGAAGGTAAGTATGTCAGCCGTACCGCATTGATTGAAAAGTGTTGGGAGTCGGAGAATTTTATAGA
TGATAATACTTTAGCAGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTATAGATTTAATTGAAACTA
AGAAGAATGTTGGATATAAGGTGTCTTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

77.376

99.55

0.77