Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   J2N82_RS01310 Genome accession   NZ_CP071505
Coordinates   275582..276478 (+) Length   298 a.a.
NCBI ID   WP_053024587.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain 12b     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 270582..281478
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J2N82_RS01285 (J2N82_01285) - 271221..271322 (+) 102 WP_016930637.1 SE2200 family small protein -
  J2N82_RS01290 (J2N82_01290) - 271464..272399 (+) 936 WP_110708891.1 LCP family protein -
  J2N82_RS01295 (J2N82_01295) - 272489..273964 (-) 1476 WP_016930640.1 alkaline phosphatase -
  J2N82_RS01300 (J2N82_01300) - 274717..274881 (+) 165 WP_016930641.1 hypothetical protein -
  J2N82_RS01305 (J2N82_01305) braR 274911..275579 (+) 669 WP_053024588.1 response regulator transcription factor Regulator
  J2N82_RS01310 (J2N82_01310) braS 275582..276478 (+) 897 WP_053024587.1 sensor histidine kinase Regulator
  J2N82_RS01315 (J2N82_01315) - 276653..277402 (+) 750 WP_053024586.1 ABC transporter ATP-binding protein -
  J2N82_RS01320 (J2N82_01320) - 277404..279395 (+) 1992 WP_207323693.1 FtsX-like permease family protein -
  J2N82_RS01325 (J2N82_01325) - 279485..280291 (+) 807 WP_207323694.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34832.38 Da        Isoelectric Point: 6.7250

>NTDB_id=545785 J2N82_RS01310 WP_053024587.1 275582..276478(+) (braS) [Staphylococcus haemolyticus strain 12b]
MLKAFIKSILNEIIIVITFILLFLLIFFLFNLPLNAYLLGAGIMLFIMIIYWLVQLSGFREQVQMRDIIHELEHELQQVK
SDQTEYQANVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVKINDL
VHPLIMKYSIQFIDQKTKIHYERYEDEVLTDAQWCSIMIEQILNNALKYARGKDIWITFDQQQHVLTIRDNGVGISQADL
PKIFDKGYSGYNGRLNANSSGIGLFIVKHISQHLHHHVDVQSELNKGTAFSIYFPKNN

Nucleotide


Download         Length: 897 bp        

>NTDB_id=545785 J2N82_RS01310 WP_053024587.1 275582..276478(+) (braS) [Staphylococcus haemolyticus strain 12b]
ATGCTGAAAGCTTTTATTAAATCAATATTAAATGAAATTATTATAGTTATCACATTTATATTATTATTTTTACTTATCTT
CTTTCTATTTAATTTGCCACTGAATGCGTATCTATTAGGTGCGGGAATAATGCTGTTCATCATGATAATTTATTGGTTAG
TACAATTAAGTGGGTTTAGAGAACAAGTTCAGATGAGAGACATTATTCATGAACTAGAACATGAATTGCAACAGGTGAAA
AGTGATCAAACTGAATATCAAGCTAATGTGGAGAATTACTTCTTAACGTGGGTTCATCAAATGAAGACGCCTATTACAGC
ATCTAAATTATTGTTAGAGCGTAATGAAGATAATGTCGTCAATCGAGTGCGGCAAGAAATTATCCAAATTGATAATTATA
CAAGTTTAGCGTTAAGTTATTTAAAATTGATGAACCAAGAAACGGATATGTCCTTTTCAAAAGTAAAGATTAATGACCTT
GTCCATCCATTAATTATGAAATATTCTATTCAATTTATTGATCAGAAGACAAAGATTCATTATGAACGGTATGAGGATGA
AGTTCTGACTGATGCACAATGGTGTTCGATCATGATTGAACAGATTCTAAATAATGCATTGAAGTATGCGCGAGGTAAGG
ACATTTGGATTACGTTTGACCAACAACAGCATGTATTGACTATTCGTGATAATGGTGTCGGTATTAGTCAAGCTGACTTA
CCGAAGATCTTTGATAAAGGCTATTCAGGATATAATGGTCGATTGAATGCTAATTCATCAGGCATTGGATTGTTTATTGT
TAAACATATCTCTCAACATTTACATCATCATGTAGATGTACAGTCTGAGTTGAACAAAGGTACGGCATTTAGTATTTATT
TCCCGAAAAATAATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

62.671

97.987

0.614