Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   LOZ98_RS17705 Genome accession   NZ_CP087328
Coordinates   3612193..3612828 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain OC074     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3607193..3617828
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LOZ98_RS17685 - 3607271..3608086 (+) 816 WP_000011163.1 DsbC family protein -
  LOZ98_RS17690 - 3608332..3609633 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  LOZ98_RS17695 thrC 3609689..3610828 (+) 1140 WP_000063593.1 threonine synthase -
  LOZ98_RS17700 pbpG 3610934..3611980 (-) 1047 WP_003384760.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  LOZ98_RS17705 letA 3612193..3612828 (+) 636 WP_000633799.1 response regulator Regulator
  LOZ98_RS17710 pilS 3612839..3614407 (+) 1569 WP_004737883.1 PAS domain-containing sensor histidine kinase Regulator
  LOZ98_RS17715 - 3614432..3615853 (+) 1422 WP_258580111.1 sigma-54 dependent transcriptional regulator -
  LOZ98_RS17720 - 3615857..3617041 (-) 1185 WP_004737879.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=545290 LOZ98_RS17705 WP_000633799.1 3612193..3612828(+) (letA) [Acinetobacter baumannii strain OC074]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=545290 LOZ98_RS17705 WP_000633799.1 3612193..3612828(+) (letA) [Acinetobacter baumannii strain OC074]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGTGTAGAAACAACCCGTCGTTTATTACAGACGGCCCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACCTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55