Detailed information NTG0544958

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: J0W33_RS09095
• Genome accession: NZ_CP071319
• Coordinates: 1906890..1908245 (-)
• Length: 451 a.a.
• NCBI ID: WP_042119426.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain GXNN62X4
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 1901890..1913245

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J0W33_RS09080 (J0W33_09080)	lptG	1902942..1904012 (+)	1071	WP_206896625.1	LPS export ABC transporter permease LptG	-
J0W33_RS09085 (J0W33_09085)	gpmI	1904131..1905678 (+)	1548	WP_005181570.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
J0W33_RS09090 (J0W33_09090)	-	1905702..1906871 (+)	1170	WP_005181572.1	S41 family peptidase	-
J0W33_RS09095 (J0W33_09095)	pilR	1906890..1908245 (-)	1356	WP_042119426.1	sigma-54-dependent transcriptional regulator	Regulator
J0W33_RS09100 (J0W33_09100)	pilS	1908317..1909885 (-)	1569	WP_104489117.1	sensor histidine kinase	Regulator
J0W33_RS09105 (J0W33_09105)	-	1909900..1910535 (-)	636	WP_005181577.1	response regulator	-
J0W33_RS09110 (J0W33_09110)	-	1910753..1911835 (+)	1083	WP_127799456.1	serine hydrolase	-
J0W33_RS09115 (J0W33_09115)	thrC	1911928..1913073 (-)	1146	WP_005181581.1	threonine synthase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50637.33 Da
• Isoelectric Point: 6.7145

>NTDB_id=544958 J0W33_RS09095 WP_042119426.1 1906890..1908245(-) (pilR) [Acinetobacter indicus strain GXNN62X4]
MQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPINQKHLEQLLEKALNQPLFKAHSQEADQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVVAN
LVHRLSNRSDGPFIAINCGAIPGDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQEK
RIRPVGSDTEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIHSKT
LSERAQQFLLEQYYPGNVRELRNIIERAMTLSDDDVIDLPHLQTAPLRKMAPLAEPETDTATPVTADALPAAPRKLPEEG
LELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1356 bp

>NTDB_id=544958 J0W33_RS09095 WP_042119426.1 1906890..1908245(-) (pilR) [Acinetobacter indicus strain GXNN62X4]
ATGCAAATGACATTGGCGCGCATGGGGATTCAAACACACGTGGCACACCGGCTGGAGCAGGCACGGCAGTTGCTGTCCAG
TCATCACTATGATGCTTGCATCACCGATCTGAATTTGCCTGATGGAAATGGCCTGCAACTGGTCGAGCTGATTGCCCAGC
ATTTTCCGCAGCTGCCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCTGCGCTCAAAGCCGGAGCC
TTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTGCTGGAAAAAGCACTGAATCAGCCGCTGTTTAA
AGCACATAGCCAGGAAGCGGACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTGCCAATTCAGCAACTACGCACCA
CCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGCGGTGAATCAGGCACCGGGAAAGAAGTGGTGGCCAAT
CTGGTGCATCGCCTCAGCAACCGCAGTGACGGGCCTTTTATTGCCATCAACTGTGGTGCCATTCCGGGCGATTTGATGGA
AAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGTGCAGCGCAGGACAAACAGGGCCTGATCCAGTCAGCACACG
GCGGTAGCCTGTTCCTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTGAAACTGCTGCGCGCGGTGCAGGAAAAA
CGGATTCGTCCGGTCGGTTCCGATACGGAAATTGATGTTGATTTCCGGATTATCAGCGCCAGCCATCAGGACCTGGAAGC
ATTAGTCCAGCAAGGCCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTGATGGATATTGTGCTGCCGCCACTGCGTG
AGCGCGGTCAAGATATTTTATTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATACACAGCAAAACC
CTGTCGGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTACGCAATATCATTGAACG
CGCCATGACCTTGAGTGATGATGATGTGATTGATCTGCCACATCTGCAGACCGCACCGTTACGCAAGATGGCGCCACTGG
CCGAGCCAGAAACCGACACTGCAACACCGGTTACAGCCGATGCCCTGCCCGCTGCTCCGCGTAAACTGCCGGAAGAAGGA
CTGGAGCTGTTTCTGGAGAAAATCGAAAAAGAGATTTTGCTGAATGCGCTGAATCTGACCCATTGGAACCGGACTTTGGC
TGCGAAAAAACTGGGGATGTCGTTTCGTTCCCTGCGTTATCGGCTGAAGAAATTCGGACTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (3-97)

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

• Bacterial regulatory protein, Fis family (HTH_8) (404-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	73.836	100	0.738
pilR	Pseudomonas aeruginosa PAK	50.334	99.557	0.501