Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   J0W32_RS04145 Genome accession   NZ_CP071317
Coordinates   864384..868874 (-) Length   1496 a.a.
NCBI ID   WP_180056425.1    Uniprot ID   -
Organism   Acinetobacter indicus strain GXNN15X4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 859384..873874
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J0W32_RS04115 (J0W32_04115) elsL 860440..860970 (-) 531 WP_104488696.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  J0W32_RS04120 (J0W32_04120) - 860967..861356 (-) 390 WP_180006974.1 YbaN family protein -
  J0W32_RS04125 (J0W32_04125) - 861447..862349 (+) 903 WP_168396748.1 DUF1853 family protein -
  J0W32_RS04130 (J0W32_04130) - 862450..862596 (+) 147 WP_005179532.1 entericidin A/B family lipoprotein -
  J0W32_RS04135 (J0W32_04135) dapE 862723..863856 (+) 1134 WP_180006973.1 succinyl-diaminopimelate desuccinylase -
  J0W32_RS04140 (J0W32_04140) - 863926..864387 (-) 462 WP_075167114.1 hypothetical protein -
  J0W32_RS04145 (J0W32_04145) chpA 864384..868874 (-) 4491 WP_180056425.1 Hpt domain-containing protein Regulator
  J0W32_RS04150 (J0W32_04150) - 869031..871103 (-) 2073 WP_206862831.1 methyl-accepting chemotaxis protein -
  J0W32_RS04155 (J0W32_04155) - 871149..871685 (-) 537 WP_005179538.1 chemotaxis protein CheW -
  J0W32_RS04160 (J0W32_04160) - 871689..872057 (-) 369 WP_005179539.1 PleD family two-component system response regulator -
  J0W32_RS04165 (J0W32_04165) pilG 872074..872457 (-) 384 WP_005179541.1 twitching motility response regulator PilG Regulator
  J0W32_RS04170 (J0W32_04170) - 872829..873380 (+) 552 WP_225876431.1 hypothetical protein -

Sequence


Protein


Download         Length: 1496 a.a.        Molecular weight: 166682.15 Da        Isoelectric Point: 4.3135

>NTDB_id=544896 J0W32_RS04145 WP_180056425.1 864384..868874(-) (chpA) [Acinetobacter indicus strain GXNN15X4]
MKEILKNLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELKDLLAQWAKQPNDQETLTTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVISGSLTLSAQVQQFATAVANVFEYKLYPSFKHAQPMALDLRPLVLLGQQLQQNLSPEPALEELLQL
ASSLTSSDSITGLEFDTASTDEQVAVDAELAVADSVEEDPLAAETLAIFIEEAEEHLLTVDRFLAHDELKTQDYNGLIRA
LHTLRGSSSMAHIEQIFDASSKVENLFKTLLQDEIKSTSKETALLLQYAEFVRDYLHLLPQNDSAGMDRIYQTFNTAWQN
YGFSLEDVDESVNPQGLVSKLIELNIDQLLDAEFEFDQRAQAEYPEYIQTLSHQAKLLVERTDNRASQGIHDFTQELQLA
YAALLDKPSLLHSDYAFELFGQAHQEFIHLFDTLAAGQRVSLSEDAQKIINNLSAFVQQDIEALSPETDTTEAVTETAET
GAGLNLAVLSQRLEADRQYMDSAEANKDFDPDLLDIFLEEAEELLTGIDQDVNSWSQDSSNTAALNNLMRHLHTLKGGAN
MIAASHIGLIAHHLETIYERIINRQMSASTALIQIIRLVQDNIADRIQTIREQQVDYPAQESLAILENISELAQGQLVEA
ESLAVAAEATSSADVQQSDASALEFELEPAPAETAYAAPEDEQPDTSSEPVLEDAPTLAEQTIPTDAVSTTENDGEDNLH
SIVEETFLEEAEELLDTTESLLKQWFDHRSDRSILLQLQRAAHSLKGGARMAEIEPVAVIAYQLENTFEQFAVHQFNSNA
YDALLNTTVAWLKEAIFQRDYSNFDSLKASLESIEYVNATAQLPERFNTADLLAPSKTFEFVQGDGAEPPSMQGEWSETA
QLDNSNEMIRISADLVEKMIDLSGENAINRSRIEMELGQLGGTLNEMELAIKRLADQLRRMEGELESQIIAKHGDEHSRY
TDFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLADKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRIVR
QTSSTLNRPAELVVHNTEGELDRTILERLISPFEHMLRNAVDHGLEDAAVRKQAAKPEVGQIELNIGRQGTDVLISFTDD
GKGIDETKIHAKALSLGLIQPEQQLDKKEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVEVDSELGKGTT
FSIRVPTTVAVSDALMVKVGDQQFAIPLAQIDRIVRISPSALESYFSSKDDYFKIDQQNYKLRYLSEFVANQPLPRLSNI
AHSLPVLLIKGNTGQTIALLVDQLIGSRGQIVMKPIGQQFSSVGSIAGATILGDGQVCLILDGQNIARQIQATQRIKHVM
EPREVQRRDTRRLVMIVDDSVTVRKVTSRLLERQGFDVVTAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTNLVRHH
DIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIENILHSSEAKA

Nucleotide


Download         Length: 4491 bp        

>NTDB_id=544896 J0W32_RS04145 WP_180056425.1 864384..868874(-) (chpA) [Acinetobacter indicus strain GXNN15X4]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACTGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTCT
AGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGCTAAAAGACCTATTGGCTCAATGGGCCAAGCAGCCTAACG
ATCAGGAAACGCTAACCACCATTCGCCGTCATTTTCATACCTTAAAAGGTTCGGGACGCATGGTTGGGGCCAAGTCGGCA
GGGGAGCTGGCCTGGACGGTTGAAGATACCTTAAACCGGGTCATTTCCGGTAGTCTGACCCTGTCAGCGCAGGTGCAGCA
GTTTGCAACCGCGGTGGCGAATGTCTTTGAATACAAACTTTATCCAAGCTTTAAACATGCTCAGCCGATGGCACTGGACC
TGCGTCCATTGGTGCTGTTAGGACAACAATTACAACAAAATTTAAGTCCTGAACCGGCCTTAGAAGAACTTCTACAACTG
GCGAGCAGCTTAACATCCAGCGACAGTATTACTGGTCTAGAGTTTGATACAGCAAGCACTGATGAGCAGGTTGCTGTAGA
TGCCGAGCTGGCTGTGGCTGATAGTGTTGAAGAAGATCCGTTAGCGGCTGAAACACTGGCCATCTTTATTGAAGAAGCAG
AAGAACACCTGTTAACGGTGGATCGCTTCCTGGCACATGATGAGCTGAAAACCCAGGATTACAATGGCCTGATTCGTGCC
CTGCATACCTTGCGCGGCAGTTCATCCATGGCACACATCGAACAGATTTTTGATGCCAGCTCCAAGGTCGAAAACCTGTT
CAAGACCCTGTTGCAGGATGAAATTAAATCGACCTCCAAAGAAACCGCACTGTTATTGCAATATGCTGAATTTGTGCGGG
ATTATCTGCATCTGTTGCCGCAGAATGACAGTGCCGGCATGGACCGGATTTATCAGACCTTCAATACTGCATGGCAGAAC
TATGGCTTTAGCCTGGAAGATGTTGATGAATCAGTGAATCCGCAAGGTTTGGTATCCAAGCTGATTGAACTGAATATTGA
TCAGTTACTCGATGCCGAGTTCGAATTTGACCAGCGTGCGCAGGCTGAATATCCGGAATATATCCAGACCCTGAGCCATC
AGGCGAAGCTACTGGTAGAGCGTACCGATAACCGTGCCTCTCAGGGTATTCATGATTTTACCCAGGAATTACAACTGGCC
TATGCAGCCTTGCTGGACAAGCCAAGCCTGCTGCATAGCGATTATGCCTTTGAATTATTTGGACAGGCGCATCAGGAATT
TATCCATCTGTTTGATACCCTGGCTGCCGGGCAACGCGTCAGCTTAAGCGAAGATGCTCAGAAGATCATCAATAACCTGA
GTGCCTTTGTACAGCAGGATATTGAAGCACTAAGCCCAGAAACTGATACCACAGAAGCTGTAACCGAAACGGCTGAAACC
GGTGCAGGGCTGAATCTGGCCGTATTGTCACAGCGTCTGGAAGCTGACCGTCAATACATGGACAGCGCTGAGGCCAATAA
GGACTTTGATCCAGATCTGCTGGACATTTTCCTGGAAGAAGCCGAAGAGTTACTTACGGGTATTGACCAGGATGTTAACA
GCTGGAGCCAAGACTCGAGCAATACTGCTGCACTGAACAATCTGATGCGCCATTTGCACACCTTAAAAGGTGGTGCCAAC
ATGATTGCAGCCAGCCATATCGGTCTGATTGCGCACCATTTAGAAACTATTTATGAGCGCATCATTAACCGTCAAATGAG
CGCATCGACCGCATTGATTCAGATTATCCGTCTGGTTCAGGACAATATTGCGGACCGTATCCAGACCATCCGTGAACAGC
AGGTCGATTATCCGGCGCAAGAATCACTGGCGATTCTGGAAAATATTAGCGAACTGGCCCAAGGTCAACTGGTTGAAGCT
GAATCGCTGGCAGTGGCGGCTGAAGCAACCTCTAGCGCAGATGTACAACAGTCTGATGCATCTGCACTTGAATTTGAGTT
GGAACCAGCACCTGCAGAAACAGCCTATGCTGCGCCTGAAGATGAGCAGCCAGACACCAGCAGCGAACCGGTACTGGAAG
ATGCACCGACCCTGGCTGAGCAAACCATCCCTACAGATGCGGTATCTACTACTGAAAATGACGGTGAAGACAATCTGCAT
TCGATTGTGGAAGAAACCTTCCTGGAAGAAGCCGAGGAACTGCTCGACACCACAGAAAGCCTGTTAAAGCAGTGGTTTGA
CCATCGTAGTGACCGAAGCATTTTGCTGCAGTTACAACGTGCTGCGCACAGCCTGAAAGGTGGCGCGCGTATGGCCGAAA
TCGAGCCGGTGGCCGTGATTGCTTATCAGCTGGAAAATACCTTTGAACAGTTCGCGGTGCATCAGTTTAATTCCAATGCC
TATGATGCCTTGCTCAACACCACTGTGGCCTGGTTAAAAGAAGCCATCTTCCAGCGCGATTACAGCAATTTTGATAGCCT
GAAAGCCAGCCTGGAGTCGATTGAATACGTCAATGCGACGGCACAGCTGCCAGAACGCTTCAATACCGCCGATCTGCTGG
CGCCAAGCAAAACCTTCGAATTTGTGCAGGGTGATGGTGCCGAGCCGCCATCCATGCAGGGCGAATGGAGCGAAACCGCA
CAGCTGGATAACAGCAATGAGATGATCCGTATTTCGGCTGATCTGGTTGAGAAGATGATTGACCTGTCGGGTGAAAACGC
GATTAACCGCTCGCGAATCGAGATGGAGCTGGGTCAGCTGGGCGGTACCCTGAATGAAATGGAACTGGCGATTAAACGTC
TGGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAAAGCCAGATTATTGCCAAACATGGTGATGAACATTCACGCTAT
ACCGACTTCGACCCGCTGGAGATGGACCAGTATTCATCCTTGAACCAGCTGTCGAAATCGTTGGCGGAATCGGCGTCGGA
CTTGGTGGACTTTAAGACCACGCTGGCGGACAAGATTCGTGATGCTGAAGGTCTGTTACTGCAACAGTCGCGGATTCAGG
CAGAAATTCAGGAAAGCCTGATGCGCACCCGTCTGGTACCGTTCTCGCGCATGTTGCCACGTTTACAGCGGATTGTGCGT
CAGACTTCATCGACCTTAAACCGTCCTGCCGAGCTGGTGGTACACAATACCGAAGGCGAGCTGGACCGGACTATTCTGGA
ACGCCTGATTTCACCATTTGAACACATGCTGCGTAATGCGGTGGACCATGGCCTGGAAGATGCCGCTGTACGTAAACAGG
CAGCGAAGCCGGAAGTGGGCCAGATTGAGCTGAACATTGGCCGTCAGGGCACTGATGTACTGATTAGCTTTACCGATGAT
GGTAAGGGGATTGATGAAACCAAAATTCACGCCAAAGCCCTGAGCCTTGGCCTGATTCAGCCAGAGCAACAGCTGGACAA
GAAAGAAATTCTGCAGCTGATTTTCCATCCGGGCTTTAGTACCGCACAGGCCGTGACCCAGATTTCGGGTCGTGGCGTCG
GTCTGGACGTGGTGCAAAGCGAAATTAAAGCGCTGGGCGGCCATGTCGAGGTCGATTCTGAACTCGGTAAAGGCACTACT
TTCAGTATTCGCGTACCGACCACAGTGGCGGTATCCGATGCCTTGATGGTAAAAGTTGGCGATCAGCAGTTCGCAATTCC
ATTGGCGCAAATTGACCGTATTGTACGAATTTCACCTTCTGCGCTGGAAAGTTACTTCAGCAGCAAAGATGACTACTTCA
AGATTGATCAGCAAAACTATAAGTTGCGCTATCTGTCCGAGTTTGTTGCCAATCAGCCATTGCCGCGTTTAAGCAATATC
GCACATTCATTGCCGGTGCTGCTGATTAAAGGCAATACTGGTCAGACCATTGCCTTACTGGTCGATCAGCTGATTGGTTC
ACGTGGCCAGATTGTGATGAAACCGATTGGCCAGCAGTTCTCCAGCGTGGGTTCGATTGCCGGCGCGACCATTCTCGGTG
ATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGATTCAGGCAACCCAGCGCATCAAGCATGTGATG
GAGCCGCGTGAAGTACAGCGTCGTGATACCCGTCGTCTGGTGATGATTGTGGATGACTCGGTGACCGTACGTAAGGTCAC
GTCACGTCTGCTCGAACGTCAGGGCTTTGATGTGGTCACGGCCAAAGACGGTGTCGATGCGATTGAGCAGCTGGAAAATG
TTAAACCGGATCTGATGCTGCTGGATATTGAAATGCCGCGTATGGATGGCTTTGAGGTGACCAACCTGGTACGCCACCAT
GACATCCATCGTGACTTGCCAATTATCATGATTACCTCGCGTACCGGTGAAAAACACCGCGAACGTGCCTTTAGCTTGGG
GGTAACGCACTATATGGGTAAACCGTTCCAGGAAGCAGAACTGCTTGCCAATATTGAAAACATTTTGCATAGCAGTGAGG
CTAAAGCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.301

100

0.624