Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   J0J33_RS01600 Genome accession   NZ_CP071295
Coordinates   319095..320342 (-) Length   415 a.a.
NCBI ID   WP_086583290.1    Uniprot ID   -
Organism   Lactococcus sp. LG1267     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 314095..325342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J0J33_RS10920 - 315674..316270 (-) 597 Protein_285 PolC-type DNA polymerase III N-terminal domain-containing protein -
  J0J33_RS01590 (J0J33_01590) - 316376..316750 (-) 375 WP_019291560.1 hypothetical protein -
  J0J33_RS01595 (J0J33_01595) - 317218..319068 (-) 1851 WP_017369962.1 proline--tRNA ligase -
  J0J33_RS01600 (J0J33_01600) eeP 319095..320342 (-) 1248 WP_086583290.1 RIP metalloprotease RseP Regulator
  J0J33_RS01605 (J0J33_01605) - 320519..321313 (-) 795 WP_019291563.1 phosphatidate cytidylyltransferase -
  J0J33_RS01610 (J0J33_01610) - 321310..322047 (-) 738 WP_019292981.1 isoprenyl transferase -
  J0J33_RS01615 (J0J33_01615) yajC 322247..322582 (-) 336 WP_019292982.1 preprotein translocase subunit YajC -
  J0J33_RS01620 (J0J33_01620) - 322657..323304 (-) 648 WP_173817272.1 DNA alkylation repair protein -
  J0J33_RS01625 (J0J33_01625) rlmH 323301..323780 (-) 480 WP_019291566.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  J0J33_RS01630 (J0J33_01630) htrA 324084..325301 (+) 1218 WP_019291567.1 S1C family serine protease Regulator

Sequence


Protein


Download         Length: 415 a.a.        Molecular weight: 45089.51 Da        Isoelectric Point: 5.8072

>NTDB_id=544701 J0J33_RS01600 WP_086583290.1 319095..320342(-) (eeP) [Lactococcus sp. LG1267]
MIQTLVTFIIVFGIIVVVHEYGHLFFAKRAGILVREFSIGMGPKIFAHQAKDGTFYSIRILPLGGYVRMAGWGDDTTEIK
KGTPASLMIVENQVVKINLSERVTLENSVPMLVTEYDFEEALFIEGEVFGETKRYSVDHDATIIEADGTELRIAPRDVQY
QSASVLGKILTNFAGPLNNFILGIIAFIIITFMQGGVPSNTNQIGQVQSGTPAYSAGLQSKDKIQAVNGEKTNNWEEVVQ
RIGANDGSEIKLDIERAGATKTLELKPEKIDGRYRIGITQTIKTGFLDKLTGGFTQAANATTLIFKALGNLIAQPSLDKL
GGPVAIYDLSGQAAREGLLSVIALLAMLSINLGIVNLIPIPVLDGGKIVLNIVEALRGKPLSQEKEGILTLVGLVFMVVL
MIAVTWNDILRAFIR

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=544701 J0J33_RS01600 WP_086583290.1 319095..320342(-) (eeP) [Lactococcus sp. LG1267]
TTGATTCAAACATTGGTAACATTTATCATTGTCTTTGGTATTATTGTTGTTGTACATGAGTATGGTCATCTGTTCTTTGC
TAAGCGCGCGGGGATTTTAGTCCGCGAGTTTTCCATTGGAATGGGCCCCAAAATTTTTGCACATCAAGCCAAAGATGGTA
CGTTTTATAGCATTCGTATACTTCCTCTTGGAGGTTATGTCCGCATGGCGGGCTGGGGCGATGATACAACGGAAATAAAA
AAAGGAACCCCGGCATCTTTGATGATTGTTGAAAATCAGGTGGTTAAAATTAATCTTTCTGAGCGGGTGACTTTGGAAAA
TAGTGTCCCCATGCTGGTCACTGAATACGATTTTGAAGAAGCACTTTTCATCGAAGGAGAAGTTTTTGGTGAAACAAAAC
GTTATTCAGTTGACCATGATGCAACAATTATCGAAGCGGATGGCACGGAACTTCGTATCGCTCCACGAGACGTACAATAT
CAAAGTGCCAGCGTTCTCGGCAAGATTTTAACAAATTTTGCTGGTCCTTTAAATAACTTTATTTTAGGGATTATAGCTTT
TATTATCATCACTTTTATGCAAGGTGGTGTACCTTCTAATACAAATCAAATCGGACAAGTCCAATCTGGCACCCCTGCTT
ATTCGGCAGGTTTACAGTCAAAGGATAAAATCCAAGCAGTCAATGGTGAAAAAACCAATAACTGGGAAGAAGTTGTCCAA
AGGATTGGTGCAAATGATGGCAGTGAAATCAAGCTGGATATCGAACGTGCAGGTGCGACGAAGACACTGGAGCTCAAGCC
AGAAAAAATTGACGGAAGATACCGCATTGGTATCACTCAAACAATCAAAACTGGCTTTTTAGATAAGCTAACGGGTGGCT
TTACTCAGGCTGCTAACGCAACAACGTTGATATTTAAAGCTTTAGGTAACCTCATTGCACAGCCAAGTCTTGATAAACTT
GGTGGGCCCGTTGCCATTTATGATTTAAGTGGGCAAGCAGCCCGAGAAGGCCTATTATCTGTTATCGCTTTACTTGCCAT
GCTCTCAATTAATCTGGGAATCGTAAATTTAATCCCAATCCCCGTCCTTGACGGGGGGAAAATTGTCCTCAATATTGTTG
AGGCCCTACGAGGCAAACCACTTTCACAAGAAAAAGAAGGAATTTTAACACTTGTTGGTCTTGTCTTTATGGTGGTCTTA
ATGATTGCTGTGACTTGGAATGATATCCTCCGAGCCTTTATTAGATAA

Domains


Predicted by InterproScan.

(7-400)

(204-256)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.086

100

0.566

  eeP Streptococcus thermophilus LMD-9

55.847

100

0.564