Detailed information
Bioinformatically predicted
Overview
| Name | pilF | Type | Machinery gene |
| Locus tag | THEOS_RS09760 | Genome accession | NC_019386 |
| Coordinates | 1864214..1866880 (+) | Length | 888 a.a. |
| NCBI ID | WP_016330152.1 | Uniprot ID | K7R7J1 |
| Organism | Thermus oshimai JL-2 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1859214..1871880
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| THEOS_RS09715 (Theos_1961) | - | 1859600..1860403 (+) | 804 | WP_016330143.1 | histidinol-phosphatase HisJ family protein | - |
| THEOS_RS09720 (Theos_1962) | - | 1860379..1860636 (-) | 258 | WP_016330144.1 | hypothetical protein | - |
| THEOS_RS09725 (Theos_1963) | - | 1860661..1861266 (-) | 606 | WP_016330145.1 | sulfite oxidase-like oxidoreductase | - |
| THEOS_RS09730 (Theos_1964) | - | 1861311..1861640 (-) | 330 | WP_016330146.1 | DUF190 domain-containing protein | - |
| THEOS_RS09735 (Theos_1965) | crcB | 1861645..1862022 (-) | 378 | WP_016330147.1 | fluoride efflux transporter CrcB | - |
| THEOS_RS09740 (Theos_1966) | ribH | 1862044..1862520 (+) | 477 | WP_041436569.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| THEOS_RS09745 (Theos_1967) | - | 1862504..1862908 (-) | 405 | WP_016330149.1 | DUF4395 domain-containing protein | - |
| THEOS_RS09750 (Theos_1968) | pgeF | 1862979..1863707 (+) | 729 | WP_016330150.1 | peptidoglycan editing factor PgeF | - |
| THEOS_RS09755 (Theos_1969) | - | 1863732..1864217 (+) | 486 | WP_016330151.1 | YqeG family HAD IIIA-type phosphatase | - |
| THEOS_RS09760 (Theos_1970) | pilF | 1864214..1866880 (+) | 2667 | WP_016330152.1 | type IV pilus assembly ATPase PilB | Machinery gene |
| THEOS_RS09765 (Theos_1971) | pilT | 1866892..1867983 (+) | 1092 | WP_016330153.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| THEOS_RS09770 (Theos_1972) | gatB | 1868001..1869431 (+) | 1431 | WP_016330154.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB | - |
| THEOS_RS09775 (Theos_1973) | purM | 1869436..1870437 (+) | 1002 | WP_016330155.1 | phosphoribosylformylglycinamidine cyclo-ligase | - |
| THEOS_RS09780 (Theos_1974) | - | 1870434..1871063 (+) | 630 | WP_016330156.1 | histidine phosphatase family protein | - |
Sequence
Protein
Download Length: 888 a.a. Molecular weight: 97983.17 Da Isoelectric Point: 5.0923
>NTDB_id=54367 THEOS_RS09760 WP_016330152.1 1864214..1866880(+) (pilF) [Thermus oshimai JL-2]
MSVLTIGDKRLGAILLDAGLLTDEELQMALERHREVGGSLAEVLVDMGLLSERRIAQAIEDHFGIPLVELHTLEIPPKVR
ALLPAEKAKELQAIPFALDEEAGVVRVAFVNPLDTLALEEVEDLTGLVVEPYQTTKSAFLYTLAKAYPELDLPVPPPPSG
PSGAEMRLGELLVEKGLISRDTLEEALVEQEKTGDLLGRILVRKGLDEKALYRVLAEQNGLEFLEDTAGLTPALEATRLL
LRSDALRYSAVPVGLKDGKVEVVLSDPRHKAQVEELLGKPTHFYLTLPRAWEELFHRVYPEKGRLGEVLVQEGKLSREAL
KEALAVQETLPKAKPLGEILVELGLVRPEDVEEALKKQRQGGGRLEDTLIQSGKLKPEALAQAMAAQLGYPYINPEESPP
DPGVALLLPEDLARRYGVFPHHLEGNSLVLLMREPRNIIVLDDLKQYFKRKGLNYTLAPAVAPEAAITKLIERFYGKAEL
GEIAKELSRGFKEEEAPSLDLDESAAQRFVKQVIREAYLQEASDIHIEPRQGDVLVRLRVDGTLRQYTTLPKGALGPVIS
VVKILGGLDIAERRLPQDGRVRYREGGVDLDLRLSTLPTVYGEKAVMRLLKKASDIPEIEGLGFAPEVFQRFKEVIEKPY
GIFLITGPTGSGKSFTTFSILKRIATPDKNTQTIEDPVEYEIPGINQTQVNPQAGLTFARALRAFLRQDPDIIMVGEIRD
SETAKIATEAALTGHLVIATLHTNDAAQAITRLDEMGVELFNISAALIGVLSQRLVRKICEGCKQEVKPDPEVLRRLGLS
EEEIRGAKLYKGLGCERCGGTGYKGRYAIHELLVVDDEIRHAIVAGKSATEIKEIARRKGMKTLREDGIYKALQGITTLE
EVLARTIE
MSVLTIGDKRLGAILLDAGLLTDEELQMALERHREVGGSLAEVLVDMGLLSERRIAQAIEDHFGIPLVELHTLEIPPKVR
ALLPAEKAKELQAIPFALDEEAGVVRVAFVNPLDTLALEEVEDLTGLVVEPYQTTKSAFLYTLAKAYPELDLPVPPPPSG
PSGAEMRLGELLVEKGLISRDTLEEALVEQEKTGDLLGRILVRKGLDEKALYRVLAEQNGLEFLEDTAGLTPALEATRLL
LRSDALRYSAVPVGLKDGKVEVVLSDPRHKAQVEELLGKPTHFYLTLPRAWEELFHRVYPEKGRLGEVLVQEGKLSREAL
KEALAVQETLPKAKPLGEILVELGLVRPEDVEEALKKQRQGGGRLEDTLIQSGKLKPEALAQAMAAQLGYPYINPEESPP
DPGVALLLPEDLARRYGVFPHHLEGNSLVLLMREPRNIIVLDDLKQYFKRKGLNYTLAPAVAPEAAITKLIERFYGKAEL
GEIAKELSRGFKEEEAPSLDLDESAAQRFVKQVIREAYLQEASDIHIEPRQGDVLVRLRVDGTLRQYTTLPKGALGPVIS
VVKILGGLDIAERRLPQDGRVRYREGGVDLDLRLSTLPTVYGEKAVMRLLKKASDIPEIEGLGFAPEVFQRFKEVIEKPY
GIFLITGPTGSGKSFTTFSILKRIATPDKNTQTIEDPVEYEIPGINQTQVNPQAGLTFARALRAFLRQDPDIIMVGEIRD
SETAKIATEAALTGHLVIATLHTNDAAQAITRLDEMGVELFNISAALIGVLSQRLVRKICEGCKQEVKPDPEVLRRLGLS
EEEIRGAKLYKGLGCERCGGTGYKGRYAIHELLVVDDEIRHAIVAGKSATEIKEIARRKGMKTLREDGIYKALQGITTLE
EVLARTIE
Nucleotide
Download Length: 2667 bp
>NTDB_id=54367 THEOS_RS09760 WP_016330152.1 1864214..1866880(+) (pilF) [Thermus oshimai JL-2]
ATGAGCGTCCTGACCATCGGCGACAAGCGGCTTGGGGCCATCCTTTTGGACGCGGGCCTCCTCACGGACGAGGAGCTCCA
GATGGCCTTAGAGCGGCACCGGGAGGTGGGGGGGTCCTTGGCCGAGGTCCTGGTGGACATGGGCCTCCTCTCCGAGCGCC
GCATCGCCCAGGCCATAGAGGACCACTTCGGCATCCCCCTGGTGGAGCTCCACACCCTGGAGATCCCCCCCAAGGTGCGG
GCCCTTCTCCCCGCGGAGAAGGCCAAGGAGCTCCAGGCCATCCCCTTCGCCCTAGACGAGGAGGCGGGGGTGGTGCGGGT
GGCCTTCGTGAACCCCCTGGACACCCTCGCCCTGGAAGAGGTGGAGGACCTCACCGGACTGGTGGTGGAACCCTACCAGA
CCACCAAGAGCGCCTTCCTCTACACCCTGGCCAAGGCCTACCCCGAGCTGGACCTCCCCGTGCCCCCACCCCCTTCCGGG
CCCAGCGGGGCGGAGATGCGCCTGGGGGAGCTTCTGGTAGAGAAGGGCCTCATAAGCCGGGACACCCTGGAGGAGGCCCT
GGTGGAGCAGGAAAAGACGGGGGACCTTTTGGGGCGGATCCTGGTGCGAAAGGGGCTGGACGAGAAGGCCCTTTACCGGG
TCCTGGCGGAGCAGAACGGCCTGGAGTTCCTGGAGGACACCGCAGGGCTCACCCCCGCCCTCGAGGCCACCCGCCTCCTC
CTCCGCTCGGATGCCCTCCGCTACAGCGCGGTGCCCGTGGGCCTTAAGGACGGGAAGGTGGAGGTGGTCCTCTCTGACCC
CCGGCACAAGGCCCAGGTGGAGGAGCTTTTGGGCAAGCCGACCCATTTCTACCTCACCCTGCCCAGGGCCTGGGAAGAGC
TCTTCCACCGGGTCTACCCGGAGAAGGGGCGGCTTGGGGAGGTGTTGGTCCAGGAGGGGAAGCTCTCCCGGGAGGCCCTG
AAGGAGGCCCTGGCGGTGCAGGAAACCCTCCCCAAGGCCAAGCCCCTGGGGGAAATCCTGGTGGAGCTGGGCCTCGTCCG
CCCCGAGGACGTGGAGGAGGCCCTGAAGAAGCAGCGGCAGGGCGGGGGGCGCCTGGAGGACACCCTGATCCAGTCCGGCA
AGCTCAAGCCCGAGGCCCTGGCCCAGGCCATGGCCGCCCAGCTGGGCTACCCCTACATCAACCCCGAGGAAAGCCCCCCC
GACCCCGGGGTGGCCCTCCTCCTCCCCGAGGACCTGGCCCGGCGCTACGGGGTCTTCCCCCACCACCTGGAGGGGAACTC
CCTGGTCCTCCTCATGCGGGAACCCCGGAACATCATCGTTCTGGACGACCTCAAGCAGTACTTCAAGCGCAAGGGGCTGA
ACTACACCCTGGCCCCCGCGGTGGCCCCGGAGGCGGCCATCACCAAGCTCATCGAACGCTTCTACGGCAAGGCGGAGCTG
GGGGAGATCGCCAAGGAGCTCTCCCGGGGCTTCAAGGAGGAGGAGGCCCCCAGCCTGGACCTGGACGAGAGCGCCGCCCA
GCGCTTCGTCAAGCAGGTGATCCGGGAGGCCTACCTCCAAGAGGCCTCGGACATCCACATCGAACCCCGCCAGGGCGACG
TCCTGGTGCGCCTCCGGGTTGACGGCACCCTGCGCCAGTACACCACCCTGCCCAAAGGGGCCTTGGGGCCGGTGATCAGC
GTGGTCAAGATCCTGGGGGGTCTGGACATCGCGGAGAGGCGTCTCCCCCAGGACGGCCGCGTGCGCTACCGGGAAGGGGG
GGTGGACCTGGACCTCCGCCTCTCCACCCTGCCCACGGTGTACGGGGAGAAGGCCGTCATGCGCCTTTTGAAAAAAGCCT
CGGACATCCCCGAGATTGAGGGGCTCGGGTTCGCCCCTGAGGTCTTCCAGCGCTTTAAGGAGGTCATCGAAAAACCCTAC
GGCATCTTCCTCATCACCGGGCCCACAGGGTCAGGGAAGAGCTTCACCACCTTCTCCATCCTGAAGCGCATCGCCACCCC
CGACAAGAACACCCAGACCATCGAGGACCCCGTGGAGTACGAGATCCCGGGCATCAACCAGACCCAGGTGAACCCGCAGG
CCGGGCTCACCTTCGCCCGCGCGCTTAGGGCCTTCCTCCGGCAGGACCCGGACATCATCATGGTGGGGGAGATCCGGGAC
TCGGAAACGGCCAAGATCGCCACCGAGGCCGCCCTCACCGGCCACCTGGTCATCGCCACCCTGCACACCAACGATGCCGC
CCAGGCCATCACCCGCCTGGACGAGATGGGGGTGGAGCTCTTCAACATCTCCGCGGCCCTCATCGGGGTGCTCTCCCAGA
GGCTGGTGCGGAAGATCTGCGAGGGGTGCAAGCAGGAGGTGAAGCCCGACCCCGAGGTCCTAAGGCGCCTGGGGCTTAGC
GAAGAGGAGATCCGGGGGGCCAAGCTCTACAAGGGCCTGGGGTGCGAGCGGTGCGGGGGCACGGGGTACAAGGGCCGCTA
CGCCATCCACGAGCTTTTGGTGGTGGACGACGAGATCCGCCACGCCATCGTGGCGGGGAAGTCGGCCACGGAGATCAAGG
AGATCGCCCGCAGGAAGGGCATGAAGACCCTGCGGGAAGACGGGATCTACAAGGCCCTCCAGGGGATCACCACCCTCGAG
GAGGTCCTGGCCCGTACCATTGAGTAA
ATGAGCGTCCTGACCATCGGCGACAAGCGGCTTGGGGCCATCCTTTTGGACGCGGGCCTCCTCACGGACGAGGAGCTCCA
GATGGCCTTAGAGCGGCACCGGGAGGTGGGGGGGTCCTTGGCCGAGGTCCTGGTGGACATGGGCCTCCTCTCCGAGCGCC
GCATCGCCCAGGCCATAGAGGACCACTTCGGCATCCCCCTGGTGGAGCTCCACACCCTGGAGATCCCCCCCAAGGTGCGG
GCCCTTCTCCCCGCGGAGAAGGCCAAGGAGCTCCAGGCCATCCCCTTCGCCCTAGACGAGGAGGCGGGGGTGGTGCGGGT
GGCCTTCGTGAACCCCCTGGACACCCTCGCCCTGGAAGAGGTGGAGGACCTCACCGGACTGGTGGTGGAACCCTACCAGA
CCACCAAGAGCGCCTTCCTCTACACCCTGGCCAAGGCCTACCCCGAGCTGGACCTCCCCGTGCCCCCACCCCCTTCCGGG
CCCAGCGGGGCGGAGATGCGCCTGGGGGAGCTTCTGGTAGAGAAGGGCCTCATAAGCCGGGACACCCTGGAGGAGGCCCT
GGTGGAGCAGGAAAAGACGGGGGACCTTTTGGGGCGGATCCTGGTGCGAAAGGGGCTGGACGAGAAGGCCCTTTACCGGG
TCCTGGCGGAGCAGAACGGCCTGGAGTTCCTGGAGGACACCGCAGGGCTCACCCCCGCCCTCGAGGCCACCCGCCTCCTC
CTCCGCTCGGATGCCCTCCGCTACAGCGCGGTGCCCGTGGGCCTTAAGGACGGGAAGGTGGAGGTGGTCCTCTCTGACCC
CCGGCACAAGGCCCAGGTGGAGGAGCTTTTGGGCAAGCCGACCCATTTCTACCTCACCCTGCCCAGGGCCTGGGAAGAGC
TCTTCCACCGGGTCTACCCGGAGAAGGGGCGGCTTGGGGAGGTGTTGGTCCAGGAGGGGAAGCTCTCCCGGGAGGCCCTG
AAGGAGGCCCTGGCGGTGCAGGAAACCCTCCCCAAGGCCAAGCCCCTGGGGGAAATCCTGGTGGAGCTGGGCCTCGTCCG
CCCCGAGGACGTGGAGGAGGCCCTGAAGAAGCAGCGGCAGGGCGGGGGGCGCCTGGAGGACACCCTGATCCAGTCCGGCA
AGCTCAAGCCCGAGGCCCTGGCCCAGGCCATGGCCGCCCAGCTGGGCTACCCCTACATCAACCCCGAGGAAAGCCCCCCC
GACCCCGGGGTGGCCCTCCTCCTCCCCGAGGACCTGGCCCGGCGCTACGGGGTCTTCCCCCACCACCTGGAGGGGAACTC
CCTGGTCCTCCTCATGCGGGAACCCCGGAACATCATCGTTCTGGACGACCTCAAGCAGTACTTCAAGCGCAAGGGGCTGA
ACTACACCCTGGCCCCCGCGGTGGCCCCGGAGGCGGCCATCACCAAGCTCATCGAACGCTTCTACGGCAAGGCGGAGCTG
GGGGAGATCGCCAAGGAGCTCTCCCGGGGCTTCAAGGAGGAGGAGGCCCCCAGCCTGGACCTGGACGAGAGCGCCGCCCA
GCGCTTCGTCAAGCAGGTGATCCGGGAGGCCTACCTCCAAGAGGCCTCGGACATCCACATCGAACCCCGCCAGGGCGACG
TCCTGGTGCGCCTCCGGGTTGACGGCACCCTGCGCCAGTACACCACCCTGCCCAAAGGGGCCTTGGGGCCGGTGATCAGC
GTGGTCAAGATCCTGGGGGGTCTGGACATCGCGGAGAGGCGTCTCCCCCAGGACGGCCGCGTGCGCTACCGGGAAGGGGG
GGTGGACCTGGACCTCCGCCTCTCCACCCTGCCCACGGTGTACGGGGAGAAGGCCGTCATGCGCCTTTTGAAAAAAGCCT
CGGACATCCCCGAGATTGAGGGGCTCGGGTTCGCCCCTGAGGTCTTCCAGCGCTTTAAGGAGGTCATCGAAAAACCCTAC
GGCATCTTCCTCATCACCGGGCCCACAGGGTCAGGGAAGAGCTTCACCACCTTCTCCATCCTGAAGCGCATCGCCACCCC
CGACAAGAACACCCAGACCATCGAGGACCCCGTGGAGTACGAGATCCCGGGCATCAACCAGACCCAGGTGAACCCGCAGG
CCGGGCTCACCTTCGCCCGCGCGCTTAGGGCCTTCCTCCGGCAGGACCCGGACATCATCATGGTGGGGGAGATCCGGGAC
TCGGAAACGGCCAAGATCGCCACCGAGGCCGCCCTCACCGGCCACCTGGTCATCGCCACCCTGCACACCAACGATGCCGC
CCAGGCCATCACCCGCCTGGACGAGATGGGGGTGGAGCTCTTCAACATCTCCGCGGCCCTCATCGGGGTGCTCTCCCAGA
GGCTGGTGCGGAAGATCTGCGAGGGGTGCAAGCAGGAGGTGAAGCCCGACCCCGAGGTCCTAAGGCGCCTGGGGCTTAGC
GAAGAGGAGATCCGGGGGGCCAAGCTCTACAAGGGCCTGGGGTGCGAGCGGTGCGGGGGCACGGGGTACAAGGGCCGCTA
CGCCATCCACGAGCTTTTGGTGGTGGACGACGAGATCCGCCACGCCATCGTGGCGGGGAAGTCGGCCACGGAGATCAAGG
AGATCGCCCGCAGGAAGGGCATGAAGACCCTGCGGGAAGACGGGATCTACAAGGCCCTCCAGGGGATCACCACCCTCGAG
GAGGTCCTGGCCCGTACCATTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilF | Thermus thermophilus HB27 |
85.264 |
100 |
0.854 |
| pilB | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
56.726 |
100 |
0.57 |