Detailed information
Bioinformatically predicted
Overview
| Name | pilC | Type | Machinery gene |
| Locus tag | THEOS_RS02815 | Genome accession | NC_019386 |
| Coordinates | 518848..520068 (+) | Length | 406 a.a. |
| NCBI ID | WP_016328828.1 | Uniprot ID | K7R3Z1 |
| Organism | Thermus oshimai JL-2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 513848..525068
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| THEOS_RS02785 (Theos_0565) | - | 514923..515546 (-) | 624 | WP_016328824.1 | GNAT family N-acetyltransferase | - |
| THEOS_RS02790 (Theos_0566) | - | 515568..516638 (+) | 1071 | WP_016328825.1 | PIG-L deacetylase family protein | - |
| THEOS_RS02795 (Theos_0567) | scpB | 516585..517112 (-) | 528 | WP_016328826.1 | SMC-Scp complex subunit ScpB | - |
| THEOS_RS02800 (Theos_0568) | - | 517100..517672 (-) | 573 | WP_016328827.1 | L-threonylcarbamoyladenylate synthase | - |
| THEOS_RS14265 (Theos_0569) | - | 517662..518752 (-) | 1091 | Protein_555 | ISAs1 family transposase | - |
| THEOS_RS02815 (Theos_0570) | pilC | 518848..520068 (+) | 1221 | WP_016328828.1 | type II secretion system F family protein | Machinery gene |
| THEOS_RS02820 (Theos_0571) | - | 520043..520495 (-) | 453 | WP_016328829.1 | EVE domain-containing protein | - |
| THEOS_RS02825 (Theos_0572) | - | 520566..521018 (+) | 453 | WP_016328830.1 | hypothetical protein | - |
| THEOS_RS02830 (Theos_0573) | - | 521028..522368 (+) | 1341 | WP_016328831.1 | FAD-binding oxidoreductase | - |
| THEOS_RS02835 (Theos_0574) | - | 522421..523362 (+) | 942 | WP_016328832.1 | GGDEF domain-containing protein | - |
| THEOS_RS02840 (Theos_0575) | - | 523359..524438 (-) | 1080 | WP_016328833.1 | prephenate dehydrogenase/arogenate dehydrogenase family protein | - |
Sequence
Protein
Download Length: 406 a.a. Molecular weight: 44916.04 Da Isoelectric Point: 10.0899
>NTDB_id=54354 THEOS_RS02815 WP_016328828.1 518848..520068(+) (pilC) [Thermus oshimai JL-2]
MPVYQYKARDRQGRLVEATIEAEDLRTAARLLRDRGLFVAEIKEPGRGLRAEVRIPALERGPGLKDLAIFSRQLATMLSA
GLTLLQSLSILERQTENKKFREIIKKVRTDVEGGSALSEALSKHKLFSRLYVNLVRAGETSGGMDVILDRLATFLEKELE
LRGKIRSAMTYPTIVFVFAVGVAYFLLTGIVPQFAQILTDLGSELPLLTRFLIALSNLLRVATLPLLLLLVVLYFVYRSY
YRTPQGRRVIDRIKLRMPVFGNLNRKTAIARFARTLALLLQSGVNILESLDITKGTAGNAIVEDLVETAKNKVQQGEPLN
LTLAQNPLVFPPMVSSMVAIGEETGALDTLLSKIADFYEREVDEAVASLTAAIEPLMIIFLGVIVGMIVAGMFLPLFKII
GTLSVQ
MPVYQYKARDRQGRLVEATIEAEDLRTAARLLRDRGLFVAEIKEPGRGLRAEVRIPALERGPGLKDLAIFSRQLATMLSA
GLTLLQSLSILERQTENKKFREIIKKVRTDVEGGSALSEALSKHKLFSRLYVNLVRAGETSGGMDVILDRLATFLEKELE
LRGKIRSAMTYPTIVFVFAVGVAYFLLTGIVPQFAQILTDLGSELPLLTRFLIALSNLLRVATLPLLLLLVVLYFVYRSY
YRTPQGRRVIDRIKLRMPVFGNLNRKTAIARFARTLALLLQSGVNILESLDITKGTAGNAIVEDLVETAKNKVQQGEPLN
LTLAQNPLVFPPMVSSMVAIGEETGALDTLLSKIADFYEREVDEAVASLTAAIEPLMIIFLGVIVGMIVAGMFLPLFKII
GTLSVQ
Nucleotide
Download Length: 1221 bp
>NTDB_id=54354 THEOS_RS02815 WP_016328828.1 518848..520068(+) (pilC) [Thermus oshimai JL-2]
ATGCCGGTCTACCAGTATAAGGCCCGCGACCGTCAGGGCCGCTTGGTGGAGGCCACCATCGAGGCCGAGGACCTGCGCAC
CGCGGCCCGCCTCCTCCGGGACCGGGGGCTTTTCGTGGCGGAGATCAAGGAGCCGGGGCGGGGCCTCCGGGCGGAGGTGC
GGATCCCCGCCCTGGAGCGGGGGCCTGGGCTCAAGGACCTCGCCATCTTCTCCCGCCAGCTCGCCACCATGCTCTCCGCG
GGGCTCACCCTCCTCCAGTCCCTTTCCATCCTGGAGCGGCAGACGGAGAACAAGAAGTTCCGGGAGATCATCAAAAAGGT
CCGCACGGACGTGGAAGGGGGTAGCGCCCTCTCCGAGGCCCTTTCCAAGCACAAGCTCTTCTCCCGGCTTTACGTGAACC
TGGTGCGGGCGGGGGAGACCTCGGGGGGGATGGACGTCATCCTGGACCGCCTGGCCACCTTCTTGGAGAAGGAGCTGGAG
CTTCGGGGGAAGATCCGGAGCGCCATGACCTACCCCACCATCGTCTTCGTCTTCGCGGTGGGCGTGGCCTACTTCCTCCT
CACGGGGATCGTGCCCCAGTTCGCCCAGATCCTCACCGACCTGGGCTCGGAGCTCCCCCTCCTCACCCGCTTCCTCATCG
CCCTCTCTAACCTCCTCCGGGTGGCCACCCTGCCCCTCCTCCTCCTCCTGGTGGTCCTCTACTTCGTCTACCGCTCCTAC
TACCGCACCCCCCAGGGAAGGCGGGTCATCGACCGCATCAAGCTCCGGATGCCCGTCTTCGGCAACCTGAACCGCAAGAC
GGCCATCGCCCGCTTCGCCCGCACCCTGGCCCTCCTCCTCCAGAGCGGGGTGAACATCCTGGAGTCTTTGGACATCACCA
AGGGCACCGCGGGGAACGCCATCGTGGAGGACCTGGTGGAGACCGCCAAAAACAAGGTCCAGCAGGGGGAGCCCCTGAAC
CTCACCCTGGCCCAGAACCCCCTGGTCTTCCCCCCCATGGTGAGCTCCATGGTGGCCATCGGCGAGGAGACGGGGGCTTT
GGACACCCTCCTTTCCAAGATCGCCGACTTCTACGAGCGGGAGGTGGACGAGGCGGTGGCCAGCCTCACCGCGGCCATCG
AGCCCCTCATGATCATCTTCCTGGGCGTCATCGTGGGCATGATCGTGGCGGGGATGTTCCTGCCCCTCTTCAAGATCATC
GGGACCCTCTCCGTGCAATAA
ATGCCGGTCTACCAGTATAAGGCCCGCGACCGTCAGGGCCGCTTGGTGGAGGCCACCATCGAGGCCGAGGACCTGCGCAC
CGCGGCCCGCCTCCTCCGGGACCGGGGGCTTTTCGTGGCGGAGATCAAGGAGCCGGGGCGGGGCCTCCGGGCGGAGGTGC
GGATCCCCGCCCTGGAGCGGGGGCCTGGGCTCAAGGACCTCGCCATCTTCTCCCGCCAGCTCGCCACCATGCTCTCCGCG
GGGCTCACCCTCCTCCAGTCCCTTTCCATCCTGGAGCGGCAGACGGAGAACAAGAAGTTCCGGGAGATCATCAAAAAGGT
CCGCACGGACGTGGAAGGGGGTAGCGCCCTCTCCGAGGCCCTTTCCAAGCACAAGCTCTTCTCCCGGCTTTACGTGAACC
TGGTGCGGGCGGGGGAGACCTCGGGGGGGATGGACGTCATCCTGGACCGCCTGGCCACCTTCTTGGAGAAGGAGCTGGAG
CTTCGGGGGAAGATCCGGAGCGCCATGACCTACCCCACCATCGTCTTCGTCTTCGCGGTGGGCGTGGCCTACTTCCTCCT
CACGGGGATCGTGCCCCAGTTCGCCCAGATCCTCACCGACCTGGGCTCGGAGCTCCCCCTCCTCACCCGCTTCCTCATCG
CCCTCTCTAACCTCCTCCGGGTGGCCACCCTGCCCCTCCTCCTCCTCCTGGTGGTCCTCTACTTCGTCTACCGCTCCTAC
TACCGCACCCCCCAGGGAAGGCGGGTCATCGACCGCATCAAGCTCCGGATGCCCGTCTTCGGCAACCTGAACCGCAAGAC
GGCCATCGCCCGCTTCGCCCGCACCCTGGCCCTCCTCCTCCAGAGCGGGGTGAACATCCTGGAGTCTTTGGACATCACCA
AGGGCACCGCGGGGAACGCCATCGTGGAGGACCTGGTGGAGACCGCCAAAAACAAGGTCCAGCAGGGGGAGCCCCTGAAC
CTCACCCTGGCCCAGAACCCCCTGGTCTTCCCCCCCATGGTGAGCTCCATGGTGGCCATCGGCGAGGAGACGGGGGCTTT
GGACACCCTCCTTTCCAAGATCGCCGACTTCTACGAGCGGGAGGTGGACGAGGCGGTGGCCAGCCTCACCGCGGCCATCG
AGCCCCTCATGATCATCTTCCTGGGCGTCATCGTGGGCATGATCGTGGCGGGGATGTTCCTGCCCCTCTTCAAGATCATC
GGGACCCTCTCCGTGCAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilC | Thermus thermophilus HB27 |
89.409 |
100 |
0.894 |
| pilC | Legionella pneumophila strain ERS1305867 |
36.658 |
98.768 |
0.362 |