Detailed information NTG0543241

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: JZI44_RS06130
• Genome accession: NZ_CP071148
• Coordinates: 1256362..1257591 (+)
• Length: 409 a.a.
• NCBI ID: WP_012679520.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. equi strain 470_001
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1251362..1262591

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JZI44_RS06105 (JZI44_06105)	-	1252089..1253372 (-)	1284	WP_042357442.1	hydroxymethylglutaryl-CoA reductase, degradative	-
JZI44_RS06110 (JZI44_06110)	-	1253359..1254534 (-)	1176	WP_012679517.1	hydroxymethylglutaryl-CoA synthase	-
JZI44_RS06115 (JZI44_06115)	-	1254719..1255558 (+)	840	WP_012679518.1	thymidylate synthase	-
JZI44_RS06120 (JZI44_06120)	-	1255639..1256136 (+)	498	WP_012679519.1	dihydrofolate reductase	-
JZI44_RS06125 (JZI44_06125)	-	1256156..1256326 (+)	171	WP_012515696.1	hypothetical protein	-
JZI44_RS06130 (JZI44_06130)	clpX	1256362..1257591 (+)	1230	WP_012679520.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
JZI44_RS06135 (JZI44_06135)	yihA	1257601..1258200 (+)	600	WP_012679521.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
JZI44_RS06140 (JZI44_06140)	-	1258564..1261566 (+)	3003	WP_012679522.1	leucine-rich repeat domain-containing protein	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45183.75 Da
• Isoelectric Point: 4.5726

>NTDB_id=543241 JZI44_RS06130 WP_012679520.1 1256362..1257591(+) (clpX) [Streptococcus equi subsp. equi strain 470_001]
MAGNRSNDIKVHCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLTEVPKPKELLEILNQYVIGQER
AKRALSVAVYNHYKRISFTESRDDDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMVQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSRKIDDNASYMQEIIAEDIQKFGLIPEFIGRLPVVAALEQLNTEDLIRI
LTEPRNALVKQYQALLSYDGVELEFEKGALEAIAGRAIERKTGARGLRSIIEETMLDIMFEVPSQEEVIKVRITKEAVEG
QSKPILEIA

Nucleotide

• Length: 1230 bp

>NTDB_id=543241 JZI44_RS06130 WP_012679520.1 1256362..1257591(+) (clpX) [Streptococcus equi subsp. equi strain 470_001]
ATGGCAGGAAATCGTAGTAACGATATTAAGGTTCATTGCTCGTTTTGCGGCAAGAGCCAAGACGAAGTGAAAAAAATTAT
TGCAGGTAATAACGTCTTTATTTGTAACGAATGTGTTGCCTTATCACAAGAAATCATCAAGGAAGAATTGGCAGAAGAGG
TTCTCGCTGATCTGACTGAGGTACCAAAGCCAAAAGAGCTGCTTGAGATTTTAAATCAATACGTCATTGGGCAGGAGCGT
GCTAAGAGAGCCTTATCAGTTGCAGTTTACAACCACTACAAGAGGATTTCATTTACTGAGAGTCGTGATGATGATGATGT
GGATTTGCAGAAGTCCAATATTCTGATGATTGGACCAACAGGCTCAGGAAAGACCTTTTTGGCACAGACCCTGGCTAAGA
GTCTGAATGTTCCGTTTGCTATTGCTGATGCAACCTCTTTGACTGAGGCAGGCTATGTCGGAGAAGATGTGGAAAATATC
CTCCTGAAATTAATTCAAGCCGCTGATTACAATGTTGAGCGTGCAGAGCGCGGCATTATTTATGTTGACGAAATTGATAA
AATCGCTAAAAAAGGTGAGAATGTCTCTATCACTCGTGACGTATCAGGAGAAGGTGTCCAACAAGCCTTGCTAAAAATCA
TTGAAGGAACGGTTGCTAGTGTTCCACCGCAAGGTGGTCGTAAGCACCCAAACCAAGAGATGGTACAGATTGATACCAAA
AATATCTTGTTTATCGTCGGAGGCGCCTTTGATGGTATCGAAGAAATTGTCAAGCAGCGCTTGGGAGAAAAGATCATTGG
CTTTGGGCAAAATAGTCGAAAGATTGATGACAATGCTTCCTATATGCAGGAGATCATTGCTGAGGATATTCAAAAATTTG
GTCTGATTCCCGAATTTATTGGACGCTTGCCTGTTGTGGCAGCGCTTGAGCAGCTTAATACTGAGGATTTGATTCGTATT
TTAACAGAGCCTAGAAATGCCCTTGTGAAGCAATATCAAGCCTTATTGTCATATGATGGCGTAGAGCTTGAGTTTGAAAA
GGGGGCTCTGGAGGCTATTGCAGGTAGGGCTATTGAGCGCAAGACTGGTGCGCGTGGTCTGAGGTCTATTATTGAAGAAA
CCATGCTGGATATCATGTTTGAGGTGCCAAGCCAAGAGGAAGTAATCAAGGTACGCATTACTAAGGAAGCTGTCGAAGGT
CAATCAAAGCCTATTTTAGAGATAGCCTAA

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-389)

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	88.509	100	0.885
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.603	98.044	0.575