Detailed information NTG0543222

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: JZI44_RS02305
• Genome accession: NZ_CP071148
• Coordinates: 451456..452502 (+)
• Length: 348 a.a.
• NCBI ID: WP_012678998.1
• Uniprot ID: C0M9I9
• Organism: Streptococcus equi subsp. equi strain 470_001
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 446456..457502

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JZI44_RS02290 (JZI44_02290)	-	447662..449320 (+)	1659	WP_012678995.1	peptide ABC transporter substrate-binding protein	-
JZI44_RS02295 (JZI44_02295)	-	449489..450403 (+)	915	WP_012678996.1	ABC transporter permease	-
JZI44_RS02300 (JZI44_02300)	-	450413..451444 (+)	1032	WP_012678997.1	ABC transporter permease	-
JZI44_RS02305 (JZI44_02305)	oppD	451456..452502 (+)	1047	WP_012678998.1	ABC transporter ATP-binding protein	Regulator
JZI44_RS02310 (JZI44_02310)	amiF	452502..453437 (+)	936	WP_012678999.1	ATP-binding cassette domain-containing protein	Regulator
JZI44_RS02315 (JZI44_02315)	rnjA	454066..455748 (-)	1683	WP_214494894.1	ribonuclease J	-
JZI44_RS02320 (JZI44_02320)	-	455750..455980 (-)	231	WP_012514942.1	DNA-dependent RNA polymerase subunit epsilon	-
JZI44_RS02325 (JZI44_02325)	tsaB	456266..456964 (+)	699	WP_012679000.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
JZI44_RS02330 (JZI44_02330)	rimI	456967..457392 (+)	426	WP_012679001.1	ribosomal protein S18-alanine N-acetyltransferase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38587.51 Da
• Isoelectric Point: 6.6666

>NTDB_id=543222 JZI44_RS02305 WP_012678998.1 451456..452502(+) (oppD) [Streptococcus equi subsp. equi strain 470_001]
MTNETILSVKNLHVDFKTYAGDVKAIRDISFELKKGETLAIVGESGSGKSVTTRTLMGLNAKNASISGNICFKGKQLNEL
KEEEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEAIMIHQSIHKTEALKRALDLMRQVGIPNAEEHLKDYPHQWSGGM
RQRAVIAIALAANPDILIADEPTTALDVTIQAQILKLMKDIQSQTASSIIFITHDLGVVAGMVDRVAVMYAGKIVEYGTV
DEVFYHPQHPYTWGLLNSMPTTATAAGSLRSIPGTPPDLLNPPKGDAFAARNEFALDIDHIKEPPMFKVSDSHYAATWLL
DERAPKITPPFPIRKRWAKWQEMEERKA

Nucleotide

• Length: 1047 bp

>NTDB_id=543222 JZI44_RS02305 WP_012678998.1 451456..452502(+) (oppD) [Streptococcus equi subsp. equi strain 470_001]
ATGACGAATGAAACCATTTTAAGTGTCAAAAACCTCCATGTTGATTTTAAAACCTACGCTGGAGATGTTAAGGCGATTCG
TGATATCAGCTTTGAGCTAAAAAAGGGAGAGACTCTTGCGATTGTGGGAGAATCAGGCTCAGGGAAATCTGTAACCACTC
GCACGCTGATGGGGTTAAATGCTAAGAATGCAAGTATTTCAGGGAATATTTGCTTTAAGGGCAAGCAGCTCAATGAGCTG
AAGGAGGAGGAATGGGTCAAGGTGCGTGGCAATGAAATTGCAATGATCTTCCAGGATCCGATGACCAGCCTTGATCCTAC
CATGACAATTGGCATGCAGATTGCAGAGGCAATAATGATTCATCAAAGCATTCATAAGACAGAAGCCTTGAAGCGTGCTT
TAGACCTGATGCGTCAGGTTGGTATCCCAAATGCTGAGGAGCACCTTAAGGATTACCCACATCAGTGGTCTGGGGGCATG
CGGCAACGGGCTGTTATTGCCATTGCTCTAGCTGCCAATCCTGATATTTTGATTGCAGATGAGCCGACAACAGCTCTTGA
TGTTACCATTCAGGCCCAGATTTTGAAGCTGATGAAGGATATTCAGTCTCAGACCGCATCATCGATTATCTTTATTACGC
ATGACCTTGGTGTTGTTGCTGGAATGGTAGATCGCGTTGCTGTCATGTATGCTGGAAAGATTGTCGAATATGGAACGGTT
GACGAGGTATTTTATCATCCGCAGCACCCTTATACCTGGGGCTTGCTCAATTCGATGCCAACAACAGCTACTGCAGCAGG
TAGCTTGAGGTCTATTCCCGGAACGCCGCCAGATTTATTAAACCCTCCAAAGGGAGATGCTTTTGCTGCCCGTAATGAGT
TTGCCCTAGACATTGACCATATCAAAGAGCCTCCAATGTTCAAGGTAAGTGACAGCCACTACGCAGCAACCTGGTTGCTA
GATGAGCGTGCTCCTAAAATAACCCCTCCATTCCCAATCCGCAAGCGTTGGGCAAAATGGCAGGAAATGGAAGAGAGGAA
GGCTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

3D structure

• AlphaFold DB: C0M9I9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.251	99.713	0.79
amiE	Streptococcus salivarius strain HSISS4	56.024	95.402	0.534
amiE	Streptococcus thermophilus LMG 18311	56.024	95.402	0.534
amiE	Streptococcus thermophilus LMD-9	56.024	95.402	0.534