Detailed information NTG0543223

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: JZI44_RS02310
• Genome accession: NZ_CP071148
• Coordinates: 452502..453437 (+)
• Length: 311 a.a.
• NCBI ID: WP_012678999.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. equi strain 470_001
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 447502..458437

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JZI44_RS02290 (JZI44_02290)	-	447662..449320 (+)	1659	WP_012678995.1	peptide ABC transporter substrate-binding protein	-
JZI44_RS02295 (JZI44_02295)	-	449489..450403 (+)	915	WP_012678996.1	ABC transporter permease	-
JZI44_RS02300 (JZI44_02300)	-	450413..451444 (+)	1032	WP_012678997.1	ABC transporter permease	-
JZI44_RS02305 (JZI44_02305)	oppD	451456..452502 (+)	1047	WP_012678998.1	ABC transporter ATP-binding protein	Regulator
JZI44_RS02310 (JZI44_02310)	amiF	452502..453437 (+)	936	WP_012678999.1	ATP-binding cassette domain-containing protein	Regulator
JZI44_RS02315 (JZI44_02315)	rnjA	454066..455748 (-)	1683	WP_214494894.1	ribonuclease J	-
JZI44_RS02320 (JZI44_02320)	-	455750..455980 (-)	231	WP_012514942.1	DNA-dependent RNA polymerase subunit epsilon	-
JZI44_RS02325 (JZI44_02325)	tsaB	456266..456964 (+)	699	WP_012679000.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
JZI44_RS02330 (JZI44_02330)	rimI	456967..457392 (+)	426	WP_012679001.1	ribosomal protein S18-alanine N-acetyltransferase	-
JZI44_RS02335 (JZI44_02335)	tsaD	457382..458398 (+)	1017	WP_012678539.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 34973.12 Da
• Isoelectric Point: 8.1293

>NTDB_id=543223 JZI44_RS02310 WP_012678999.1 452502..453437(+) (amiF) [Streptococcus equi subsp. equi strain 470_001]
MTEARKKLIEVKNVSLTFNKGKKNEVKAIDRLSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDISDGEIIFNGENVSQL
KGKKLHSFRKHAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREARVQELLKLVGLNQNHLTRYPHEFSGGQRQ
RIGIARALAVKPTFIIADEPISALDVSIQAQVVSLMQQLQKKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDE
VYNHPIHPYTKSLISAIPEPDPEKERKRIAEVYDPSQELDGQERQMHEITPGHFVLATQAEAEQYRAECGL

Nucleotide

• Length: 936 bp

>NTDB_id=543223 JZI44_RS02310 WP_012678999.1 452502..453437(+) (amiF) [Streptococcus equi subsp. equi strain 470_001]
ATGACAGAAGCTCGTAAAAAATTAATCGAAGTAAAGAATGTTTCCTTAACCTTTAACAAGGGGAAGAAAAACGAGGTTAA
GGCTATTGATCGCCTTAGCTTTGACATTTATGAGGGGGAAGTATTTGGCCTTGTTGGGGAATCAGGCTCAGGCAAGACGA
CAGTTGGTCGAGCTATTTTGAAACTGTATGACATTAGTGATGGTGAGATTATCTTTAACGGAGAAAATGTCTCCCAATTA
AAAGGGAAAAAGCTGCATAGCTTTCGTAAGCATGCACAAATGATCTTCCAAGATCCTCAGGCTAGTTTGAACGGCCGTAT
GAAAATTAGAGACATTGTTGCAGAGGGCTTAGACATTCATGGCTTGACAGCCTCAAAGGCAGAGCGTGAAGCAAGAGTCC
AGGAGCTGTTAAAGCTTGTTGGGCTCAATCAGAACCATTTGACGCGCTACCCACATGAATTTTCCGGTGGTCAACGCCAG
CGAATTGGCATTGCGCGTGCCTTGGCTGTGAAGCCGACCTTTATTATCGCAGATGAGCCGATTTCAGCGCTTGATGTGTC
GATTCAAGCACAGGTAGTGAGTCTCATGCAGCAATTGCAAAAAAAGCGTGGCTTGACCTATCTCTTTATCGCTCACGATT
TGTCTATGGTCAAATACATTTCAGACCGTATTGGTGTGATGCATTGGGGCAAAATGCTTGAGATTGGGACATCTGATGAG
GTTTACAATCACCCGATTCACCCTTATACGAAAAGCTTGATCTCGGCCATTCCTGAGCCGGATCCTGAAAAGGAGCGTAA
GCGTATTGCAGAGGTTTATGATCCTAGCCAGGAGCTAGATGGCCAAGAGCGACAAATGCATGAAATCACTCCTGGGCATT
TTGTCTTAGCGACTCAGGCCGAAGCCGAGCAGTACCGAGCAGAGTGTGGCCTTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-269)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.754	98.071	0.537
amiF	Streptococcus thermophilus LMG 18311	54.426	98.071	0.534
amiF	Streptococcus salivarius strain HSISS4	54.098	98.071	0.531