Detailed information NTG0543149

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: JZI48_RS01100
• Genome accession: NZ_CP071145
• Coordinates: 230150..230542 (-)
• Length: 130 a.a.
• NCBI ID: WP_012679302.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. equi strain 470_007
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 225150..235542

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JZI48_RS01065 (JZI48_01065)	-	225175..225678 (-)	504	WP_050315851.1	DNA cytosine methyltransferase	-
JZI48_RS01070 (JZI48_01070)	-	225662..226453 (-)	792	WP_050315852.1	DNA cytosine methyltransferase	-
JZI48_RS01075 (JZI48_01075)	-	226455..227144 (-)	690	WP_042356880.1	site-specific DNA-methyltransferase	-
JZI48_RS01080 (JZI48_01080)	-	227155..227382 (-)	228	WP_012679306.1	hypothetical protein	-
JZI48_RS01085 (JZI48_01085)	-	227375..227569 (-)	195	WP_012679305.1	hypothetical protein	-
JZI48_RS01090 (JZI48_01090)	-	227925..229325 (-)	1401	WP_012679304.1	virulence-associated E family protein	-
JZI48_RS01095 (JZI48_01095)	-	229309..230136 (-)	828	WP_012679303.1	bifunctional DNA primase/polymerase	-
JZI48_RS01100 (JZI48_01100)	ssbA	230150..230542 (-)	393	WP_012679302.1	single-stranded DNA-binding protein	Machinery gene
JZI48_RS01105 (JZI48_01105)	-	230543..231253 (-)	711	WP_012679301.1	ERF family protein	-
JZI48_RS01110 (JZI48_01110)	-	231263..232438 (-)	1176	WP_050315853.1	DEAD/DEAH box helicase family protein	-
JZI48_RS01115 (JZI48_01115)	-	232398..232871 (-)	474	WP_012679299.1	hypothetical protein	-
JZI48_RS01120 (JZI48_01120)	-	232868..233350 (-)	483	WP_012679298.1	siphovirus Gp157 family protein	-
JZI48_RS01125 (JZI48_01125)	-	233350..233691 (-)	342	WP_012679297.1	hypothetical protein	-
JZI48_RS01130 (JZI48_01130)	-	233967..234218 (-)	252	WP_012679294.1	hypothetical protein	-
JZI48_RS01135 (JZI48_01135)	-	234291..234503 (-)	213	WP_012679293.1	hypothetical protein	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14989.81 Da
• Isoelectric Point: 4.8660

>NTDB_id=543149 JZI48_RS01100 WP_012679302.1 230150..230542(-) (ssbA) [Streptococcus equi subsp. equi strain 470_007]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRAFKSQNGEREADFINCVIWRQQAENLANWAKKGVLIGITGRIQTR
NYENQQGQRVYVTEVVADNFKMLEYRQQQQQEDSFDNNNPMDIQADDLPF

Nucleotide

• Length: 393 bp

>NTDB_id=543149 JZI48_RS01100 WP_012679302.1 230150..230542(-) (ssbA) [Streptococcus equi subsp. equi strain 470_007]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGACGCAGAGCTTCGATACACTCCAAGTCAGGTGGCAGTTGC
TACGTTTACACTTGCTGTTAATCGCGCCTTTAAGAGCCAAAATGGTGAGCGCGAAGCGGATTTCATTAACTGTGTGATCT
GGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCGAAAAAGGGTGTCTTGATTGGGATTACAGGACGTATTCAGACCCGT
AACTACGAAAACCAACAGGGGCAGCGTGTGTATGTAACCGAGGTTGTTGCAGATAATTTCAAAATGCTGGAATACCGCCA
GCAACAGCAGCAAGAGGATTCATTCGATAATAACAATCCAATGGATATTCAGGCTGACGACTTGCCATTCTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.163	100	0.677
ssb	Latilactobacillus sakei subsp. sakei 23K	69.369	85.385	0.592
ssbB	Streptococcus sobrinus strain NIDR 6715-7	45.185	100	0.469
ssbB	Bacillus subtilis subsp. subtilis str. 168	53.982	86.923	0.469
ssbB/cilA	Streptococcus pneumoniae TIGR4	44.697	100	0.454
ssbB/cilA	Streptococcus pneumoniae Rx1	43.939	100	0.446
ssbB/cilA	Streptococcus mitis NCTC 12261	43.939	100	0.446
ssbB/cilA	Streptococcus pneumoniae D39	43.939	100	0.446
ssbB/cilA	Streptococcus pneumoniae R6	43.939	100	0.446
ssbB/cilA	Streptococcus mitis SK321	43.939	100	0.446
ssbA	Streptococcus mutans UA159	41.667	100	0.423
ssbB	Lactococcus lactis subsp. cremoris KW2	40.31	99.231	0.4