Detailed information NTG0543071

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: JZI57_RS08815
• Genome accession: NZ_CP071142
• Coordinates: 1821173..1822402 (-)
• Length: 409 a.a.
• NCBI ID: WP_012679520.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. equi strain 489_004
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1816173..1827402

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JZI57_RS08805 (JZI57_08805)	-	1817198..1820200 (-)	3003	WP_012679522.1	leucine-rich repeat domain-containing protein	-
JZI57_RS08810 (JZI57_08810)	yihA	1820564..1821163 (-)	600	WP_012679521.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
JZI57_RS08815 (JZI57_08815)	clpX	1821173..1822402 (-)	1230	WP_012679520.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
JZI57_RS08820 (JZI57_08820)	-	1822438..1822608 (-)	171	WP_012515696.1	hypothetical protein	-
JZI57_RS08825 (JZI57_08825)	-	1822628..1823125 (-)	498	WP_012679519.1	dihydrofolate reductase	-
JZI57_RS08830 (JZI57_08830)	-	1823206..1824045 (-)	840	WP_012679518.1	thymidylate synthase	-
JZI57_RS08835 (JZI57_08835)	-	1824230..1825405 (+)	1176	WP_012679517.1	hydroxymethylglutaryl-CoA synthase	-
JZI57_RS08840 (JZI57_08840)	-	1825392..1826675 (+)	1284	WP_042357442.1	hydroxymethylglutaryl-CoA reductase, degradative	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45183.75 Da
• Isoelectric Point: 4.5726

>NTDB_id=543071 JZI57_RS08815 WP_012679520.1 1821173..1822402(-) (clpX) [Streptococcus equi subsp. equi strain 489_004]
MAGNRSNDIKVHCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLTEVPKPKELLEILNQYVIGQER
AKRALSVAVYNHYKRISFTESRDDDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMVQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSRKIDDNASYMQEIIAEDIQKFGLIPEFIGRLPVVAALEQLNTEDLIRI
LTEPRNALVKQYQALLSYDGVELEFEKGALEAIAGRAIERKTGARGLRSIIEETMLDIMFEVPSQEEVIKVRITKEAVEG
QSKPILEIA

Nucleotide

• Length: 1230 bp

>NTDB_id=543071 JZI57_RS08815 WP_012679520.1 1821173..1822402(-) (clpX) [Streptococcus equi subsp. equi strain 489_004]
ATGGCAGGAAATCGTAGTAACGATATTAAGGTTCATTGCTCGTTTTGCGGCAAGAGCCAAGACGAAGTGAAAAAAATTAT
TGCAGGTAATAACGTCTTTATTTGTAACGAATGTGTTGCCTTATCACAAGAAATCATCAAGGAAGAATTGGCAGAAGAGG
TTCTCGCTGATCTGACTGAGGTACCAAAGCCAAAAGAGCTGCTTGAGATTTTAAATCAATACGTCATTGGGCAGGAGCGT
GCTAAGAGAGCCTTATCAGTTGCAGTTTACAACCACTACAAGAGGATTTCATTTACTGAGAGTCGTGATGATGATGATGT
GGATTTGCAGAAGTCCAATATTCTGATGATTGGACCAACAGGCTCAGGAAAGACCTTTTTGGCACAGACCCTGGCTAAGA
GTCTGAATGTTCCGTTTGCTATTGCTGATGCAACCTCTTTGACTGAGGCAGGCTATGTCGGAGAAGATGTGGAAAATATC
CTCCTGAAATTAATTCAAGCCGCTGATTACAATGTTGAGCGTGCAGAGCGCGGCATTATTTATGTTGACGAAATTGATAA
AATCGCTAAAAAAGGTGAGAATGTCTCTATCACTCGTGACGTATCAGGAGAAGGTGTCCAACAAGCCTTGCTAAAAATCA
TTGAAGGAACGGTTGCTAGTGTTCCACCGCAAGGTGGTCGTAAGCACCCAAACCAAGAGATGGTACAGATTGATACCAAA
AATATCTTGTTTATCGTCGGAGGCGCCTTTGATGGTATCGAAGAAATTGTCAAGCAGCGCTTGGGAGAAAAGATCATTGG
CTTTGGGCAAAATAGTCGAAAGATTGATGACAATGCTTCCTATATGCAGGAGATCATTGCTGAGGATATTCAAAAATTTG
GTCTGATTCCCGAATTTATTGGACGCTTGCCTGTTGTGGCAGCGCTTGAGCAGCTTAATACTGAGGATTTGATTCGTATT
TTAACAGAGCCTAGAAATGCCCTTGTGAAGCAATATCAAGCCTTATTGTCATATGATGGCGTAGAGCTTGAGTTTGAAAA
GGGGGCTCTGGAGGCTATTGCAGGTAGGGCTATTGAGCGCAAGACTGGTGCGCGTGGTCTGAGGTCTATTATTGAAGAAA
CCATGCTGGATATCATGTTTGAGGTGCCAAGCCAAGAGGAAGTAATCAAGGTACGCATTACTAAGGAAGCTGTCGAAGGT
CAATCAAAGCCTATTTTAGAGATAGCCTAA

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-389)

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	88.509	100	0.885
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.603	98.044	0.575