Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   JYA66_RS04530 Genome accession   NZ_CP071100
Coordinates   946991..947977 (+) Length   328 a.a.
NCBI ID   WP_211020333.1    Uniprot ID   -
Organism   Staphylococcus aureus strain PS/BAC/169/17/W     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 941991..952977
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JYA66_RS04510 (JYA66_000902) - 942427..944082 (+) 1656 WP_211020331.1 IS1182-like element ISSau3 family transposase -
  JYA66_RS04515 (JYA66_000903) trpS 944101..945090 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  JYA66_RS04520 (JYA66_000904) spxA 945385..945780 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  JYA66_RS04525 (JYA66_000905) mecA 946151..946870 (+) 720 WP_001217728.1 adaptor protein MecA -
  JYA66_RS04530 (JYA66_000906) coiA 946991..947977 (+) 987 WP_211020333.1 competence protein CoiA family protein Machinery gene
  JYA66_RS04535 (JYA66_000907) pepF 948025..949833 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  JYA66_RS04540 (JYA66_000908) yjbH 950293..951099 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  JYA66_RS04545 (JYA66_000909) - 951122..951487 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  JYA66_RS04550 (JYA66_000910) - 951591..952184 (-) 594 WP_000224622.1 CYTH domain-containing protein -
  JYA66_RS04555 (JYA66_000911) - 952370..952717 (+) 348 WP_001242102.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38797.42 Da        Isoelectric Point: 9.6711

>NTDB_id=542803 JYA66_RS04530 WP_211020333.1 946991..947977(+) (coiA) [Staphylococcus aureus strain PS/BAC/169/17/W]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKLGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGFIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=542803 JYA66_RS04530 WP_211020333.1 946991..947977(+) (coiA) [Staphylococcus aureus strain PS/BAC/169/17/W]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAACTGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCCGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTTTATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAACCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

97.866

100

0.979
  coiA Staphylococcus aureus MW2

97.256

100

0.973