Detailed information NTG0054229

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: C695_RS01710
• Genome accession: NC_018937
• Coordinates: 347621..348421 (+)
• Length: 266 a.a.
• NCBI ID: WP_001862983.1
• Uniprot ID: -
• Organism: Helicobacter pylori Rif1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 342621..353421

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C695_RS01675 (C695_01655)	pseH	343115..343657 (+)	543	WP_000742697.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
C695_RS01680 (C695_01660)	-	343590..344528 (-)	939	WP_000833936.1	tetraacyldisaccharide 4'-kinase	-
C695_RS01685 (C695_01665)	-	344525..345307 (-)	783	WP_001168317.1	NAD+ synthase	-
C695_RS01695 (C695_01670)	ilvC	345556..346548 (+)	993	WP_001207734.1	ketol-acid reductoisomerase	-
C695_RS01700 (C695_01675)	minD	346573..347379 (+)	807	WP_001019069.1	septum site-determining protein MinD	-
C695_RS01705 (C695_01680)	minE	347376..347609 (+)	234	WP_000051415.1	cell division topological specificity factor MinE	-
C695_RS01710 (C695_01685)	dprA	347621..348421 (+)	801	WP_001862983.1	DNA-processing protein DprA	Machinery gene
C695_RS01715 (C695_01690)	dprB	348418..348822 (+)	405	WP_000599146.1	Holliday junction resolvase RuvX	Machinery gene
C695_RS08785	-	349108..349296 (+)	189	WP_010875464.1	hypothetical protein	-
C695_RS01725	-	349238..349654 (+)	417	WP_001862988.1	tetratricopeptide repeat protein	-
C695_RS01730 (C695_01710)	-	349781..350086 (+)	306	WP_000699933.1	hypothetical protein	-
C695_RS01735 (C695_01715)	-	350070..350636 (+)	567	WP_000032376.1	hypothetical protein	-
C695_RS01740 (C695_01720)	-	350688..351044 (+)	357	WP_015056036.1	glycoside hydrolase family protein	-
C695_RS01745 (C695_01725)	-	351032..351298 (+)	267	WP_001862993.1	hypothetical protein	-
C695_RS01755 (C695_01735)	-	351604..351990 (+)	387	WP_000393582.1	DUF1294 domain-containing protein	-
C695_RS08280	-	351990..352776 (+)	787	Protein_331	hypothetical protein	-
C695_RS01770 (C695_01750)	-	352766..353101 (+)	336	WP_001862999.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29940.83 Da
• Isoelectric Point: 7.7998

>NTDB_id=54229 C695_RS01710 WP_001862983.1 347621..348421(+) (dprA) [Helicobacter pylori Rif1]
MKSHFQYSTLENIPKAFDILKDPPKKLYCVGDTKLLDTPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDVVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMEDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=54229 C695_RS01710 WP_001862983.1 347621..348421(+) (dprA) [Helicobacter pylori Rif1]
ATGAAAAGCCACTTCCAATACAGCACGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTGGACACGCCTTTAAAAGTGGCGATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCTAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGTGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTCATCTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTGGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGTGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAGAAATACCAAAAGCCTTTATTTGTTTTACCCCAACGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGGAAGATGAATTTTTAGAATATTGTGCCAAAAACCCGAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCACATTGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	100	100	1
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.074	81.203	0.398