Detailed information NTG0542071

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: JYB86_RS01285
• Genome accession: NZ_CP070997
• Coordinates: 272816..274177 (-)
• Length: 453 a.a.
• NCBI ID: WP_266097171.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain LYS68A
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 267816..279177

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JYB86_RS01270 (JYB86_01270)	lptG	268868..269938 (+)	1071	WP_127801557.1	LPS export ABC transporter permease LptG	-
JYB86_RS01275 (JYB86_01275)	gpmI	270057..271604 (+)	1548	WP_005181570.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
JYB86_RS01280 (JYB86_01280)	-	271628..272797 (+)	1170	WP_205779292.1	S41 family peptidase	-
JYB86_RS01285 (JYB86_01285)	pilR	272816..274177 (-)	1362	WP_266097171.1	sigma-54-dependent transcriptional regulator	Regulator
JYB86_RS01290 (JYB86_01290)	pilS	274243..275811 (-)	1569	WP_205779294.1	sensor histidine kinase	Regulator
JYB86_RS01295 (JYB86_01295)	-	275826..276461 (-)	636	WP_005181577.1	response regulator	-
JYB86_RS01300 (JYB86_01300)	-	276679..277761 (+)	1083	WP_127799456.1	serine hydrolase	-
JYB86_RS01305 (JYB86_01305)	thrC	277854..278999 (-)	1146	WP_152342164.1	threonine synthase	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 50881.68 Da
• Isoelectric Point: 6.7145

>NTDB_id=542071 JYB86_RS01285 WP_266097171.1 272816..274177(-) (pilR) [Acinetobacter indicus strain LYS68A]
MLMQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKA
GAFDFVSKPINQKHLEQLLEKALNQPLFKAHSQEADQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVV
ANLVHRLSNRSDGPFIAINCGAIPGDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQ
EKRIRPVGSDTEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIHS
KTLSERAQQFLLEQYYPGNVRELRNIIERAMTLSDDDVIDLPHLQTAPLRKMAPLAEPETDTATPVTADALPAAPRKLPE
EGLELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1362 bp

>NTDB_id=542071 JYB86_RS01285 WP_266097171.1 272816..274177(-) (pilR) [Acinetobacter indicus strain LYS68A]
ATGCTCATGCAAATGACATTGGCGCGCATGGGGATTCAAACACACGTGGCACACCGGCTGGAGCAAGCACGTCAGCTGCT
GTCCAGTCATCACTATGACGCCTGCATCACCGATCTGAATTTACCTGATGGCAATGGCCTGCAACTGGTCGAGCTGATTG
CCCAGCATTTTCCGCAGCTGCCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCCGCACTCAAAGCC
GGGGCCTTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTGCTGGAAAAAGCACTGAATCAGCCGCT
GTTTAAAGCACATAGTCAGGAAGCGGACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTACCGATTCAGCAACTGC
GCACCACCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGCGGTGAATCAGGCACCGGGAAAGAAGTGGTG
GCCAATCTGGTGCATCGCCTCAGCAACCGCAGTGACGGGCCTTTTATTGCCATCAACTGTGGCGCGATTCCGGGCGATTT
GATGGAAAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGTGCAGCGCAGGACAAACAGGGCCTGATCCAGTCAG
CACACGGCGGTAGCCTGTTTCTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTAAAACTGCTGCGCGCGGTGCAG
GAAAAACGGATTCGTCCGGTCGGTTCCGATACGGAAATTGATGTTGATTTCCGGATTATTAGTGCCAGCCATCAGGACCT
GGAAGCGTTAGTCCAGCAAGGCCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTGATGGATATTGTGTTGCCGCCAC
TGCGTGAGCGCGGTCAAGATATTTTATTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATACACAGC
AAAACCCTGTCAGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTGCGCAATATCAT
CGAACGTGCCATGACCTTGAGTGATGATGATGTGATTGATCTGCCGCATCTGCAAACTGCTCCTTTACGCAAGATGGCAC
CGCTGGCCGAGCCAGAAACCGACACTGCAACGCCGGTTACAGCCGATGCCCTGCCCGCTGCTCCGCGTAAATTGCCGGAA
GAAGGACTGGAGCTGTTTCTGGAGAAAATCGAAAAAGAGATTTTGCTGAATGCACTGAATCTGACCCATTGGAACCGGAC
TTTGGCTGCGAAAAAACTGGGGATGTCGTTTCGTTCCCTGCGTTATCGGCTGAAGAAATTCGGACTGGATACCGATGAAT
AA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (123-289)

• Response regulator receiver domain (Response_reg) (2-99)

• Bacterial regulatory protein, Fis family (HTH_8) (406-447)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	73.731	100	0.737
pilR	Pseudomonas aeruginosa PAK	50.444	99.338	0.501