Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | JYA46_RS02675 | Genome accession | NZ_CP070991 |
| Coordinates | 475012..475311 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain CBS2016-05 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 470012..480311
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JYA46_RS02635 (JYA46_000527) | - | 470073..470276 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| JYA46_RS02640 (JYA46_000528) | - | 470273..471259 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| JYA46_RS02645 (JYA46_000529) | - | 471259..471588 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| JYA46_RS02650 (JYA46_000530) | - | 471585..472208 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| JYA46_RS02655 (JYA46_000531) | comGA | 472260..473234 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| JYA46_RS02660 (JYA46_000532) | comGB | 473206..474276 (+) | 1071 | WP_000776418.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| JYA46_RS02665 (JYA46_000533) | comGC | 474290..474601 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| JYA46_RS02670 (JYA46_000534) | comGD | 474579..475025 (+) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| JYA46_RS02675 (JYA46_000535) | comGE | 475012..475311 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| JYA46_RS02680 (JYA46_000536) | comGF | 475229..475687 (+) | 459 | WP_072491748.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| JYA46_RS02685 (JYA46_000537) | - | 475784..475930 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| JYA46_RS02690 (JYA46_000538) | - | 475920..476444 (+) | 525 | WP_210994247.1 | shikimate kinase | - |
| JYA46_RS02695 (JYA46_000539) | gcvT | 476603..477694 (+) | 1092 | WP_072491749.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| JYA46_RS02700 (JYA46_000540) | gcvPA | 477714..479060 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=541970 JYA46_RS02675 WP_000844413.1 475012..475311(+) (comGE) [Staphylococcus aureus strain CBS2016-05]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=541970 JYA46_RS02675 WP_000844413.1 475012..475311(+) (comGE) [Staphylococcus aureus strain CBS2016-05]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |