Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   JYG31_RS02185 Genome accession   NZ_CP070976
Coordinates   440984..441106 (+) Length   40 a.a.
NCBI ID   WP_024120213.1    Uniprot ID   A0A9Q6A750
Organism   Bacillus halotolerans strain MBH1     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 435984..446106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JYG31_RS02170 (JYG31_02170) - 437589..438272 (+) 684 WP_103671924.1 response regulator transcription factor -
  JYG31_RS02175 (JYG31_02175) - 438259..439683 (+) 1425 WP_213418306.1 HAMP domain-containing sensor histidine kinase -
  JYG31_RS02180 (JYG31_02180) rapC 439852..441000 (+) 1149 WP_103671926.1 response regulator aspartate phosphatase RapC Regulator
  JYG31_RS02185 (JYG31_02185) phrC 440984..441106 (+) 123 WP_024120213.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  JYG31_RS02190 (JYG31_02190) - 441211..441303 (-) 93 WP_024120214.1 YjcZ family sporulation protein -
  JYG31_RS02195 (JYG31_02195) - 441456..441566 (-) 111 WP_024120215.1 YjcZ family sporulation protein -
  JYG31_RS02200 (JYG31_02200) - 441717..443081 (-) 1365 WP_101860981.1 aspartate kinase -
  JYG31_RS02205 (JYG31_02205) ceuB 443467..444417 (+) 951 WP_010333025.1 petrobactin ABC transporter permease YclN Machinery gene
  JYG31_RS02210 (JYG31_02210) yclO 444410..445357 (+) 948 WP_024120217.1 petrobactin ABC transporter permease YclO -

Sequence

Protein


Download         Length: 40 a.a.        Molecular weight: 4267.00 Da        Isoelectric Point: 7.1634

>NTDB_id=541705 JYG31_RS02185 WP_024120213.1 440984..441106(+) (phrC) [Bacillus halotolerans strain MBH1]
MKLKSKLFVICLAAAAVFTAVGVSEHAEASDFHVTERGMT

Nucleotide


Download         Length: 123 bp        

>NTDB_id=541705 JYG31_RS02185 WP_024120213.1 440984..441106(+) (phrC) [Bacillus halotolerans strain MBH1]
ATGAAATTGAAATCTAAGTTATTTGTTATTTGTTTGGCTGCAGCAGCTGTTTTTACAGCGGTTGGCGTCTCTGAACATGC
TGAAGCATCCGACTTTCATGTCACAGAAAGAGGAATGACGTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-40)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

87.5

100

0.875