Detailed information NTG0541704

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: JYG31_RS02180
• Genome accession: NZ_CP070976
• Coordinates: 439852..441000 (+)
• Length: 382 a.a.
• NCBI ID: WP_103671926.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain MBH1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 434852..446000

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JYG31_RS02160 (JYG31_02160)	-	435226..435906 (-)	681	WP_106021026.1	ABC transporter ATP-binding protein	-
JYG31_RS02165 (JYG31_02165)	-	435922..437376 (-)	1455	WP_213418305.1	ABC transporter permease	-
JYG31_RS02170 (JYG31_02170)	-	437589..438272 (+)	684	WP_103671924.1	response regulator transcription factor	-
JYG31_RS02175 (JYG31_02175)	-	438259..439683 (+)	1425	WP_213418306.1	HAMP domain-containing sensor histidine kinase	-
JYG31_RS02180 (JYG31_02180)	rapC	439852..441000 (+)	1149	WP_103671926.1	response regulator aspartate phosphatase RapC	Regulator
JYG31_RS02185 (JYG31_02185)	phrC	440984..441106 (+)	123	WP_024120213.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
JYG31_RS02190 (JYG31_02190)	-	441211..441303 (-)	93	WP_024120214.1	YjcZ family sporulation protein	-
JYG31_RS02195 (JYG31_02195)	-	441456..441566 (-)	111	WP_024120215.1	YjcZ family sporulation protein	-
JYG31_RS02200 (JYG31_02200)	-	441717..443081 (-)	1365	WP_101860981.1	aspartate kinase	-
JYG31_RS02205 (JYG31_02205)	ceuB	443467..444417 (+)	951	WP_010333025.1	petrobactin ABC transporter permease YclN	Machinery gene
JYG31_RS02210 (JYG31_02210)	yclO	444410..445357 (+)	948	WP_024120217.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45677.75 Da
• Isoelectric Point: 5.2483

>NTDB_id=541704 JYG31_RS02180 WP_103671926.1 439852..441000(+) (rapC) [Bacillus halotolerans strain MBH1]
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVSDHIERAEFYFKIAEAYYYMKQTYF
SLIHIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALEMAEAEQKAQLVGRAFYNLGLCYYNQDLLD
PAIEHFEKAVSTFETSRITNSLPQAYFLITLIYYKRGKHEKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQAQPNTEG
IERCFRYLKNKNMYADIEDLGLEVAKYYYEQKWFELSASYFLRVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=541704 JYG31_RS02180 WP_103671926.1 439852..441000(+) (rapC) [Bacillus halotolerans strain MBH1]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGGACCTTCAGCGT
GCCGGATGCCGAGGTGCTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGTTATATT
ACTCACTAATGGAATTTCGCCACCAGCTTATGCTTGATTATCTCGAGCCGCTGGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCACGAAATATAGACAGCAACCAAGCTGATCTGAAAGGGCTTCTCGATTATTATGTGAATTTTTT
CCGCGGAATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATATTACAAACAGGCGGAGAAAAAACTTTCTT
TTGTTTCCGATCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTACTTT
TCATTGATTCATATCAAAAATGCATATGAAATTTATGTAGAGCAGGAAACCTACAATGTTCGGATTATCCAATGCCATTT
TGTGTTCGGGGTTAACCTCATGGATGAGAGAAATTTTGAACAAGCCGCACGGCATTTCAAATTGGCGCTGGAGATGGCGG
AAGCGGAACAAAAAGCCCAATTGGTCGGAAGAGCATTTTATAATTTAGGGCTGTGTTATTACAATCAAGACCTTCTCGAC
CCTGCCATTGAACATTTTGAGAAAGCGGTTTCCACTTTTGAAACCAGCAGAATCACCAATTCTCTGCCTCAAGCATATTT
TTTAATAACACTTATTTATTATAAACGCGGAAAACATGAGAAGGCCTCGGAATATCACAAGAGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGATTACGCGGTAAAATTTGAGTTTTTACAATCCCTATATCAGGCACAGCCCAATACAGAAGGA
ATCGAACGATGTTTCCGATATTTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGGCCTAGAAGTAGCAAAATA
TTACTATGAACAAAAATGGTTTGAACTGTCTGCTTCCTACTTTCTTAGAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (224-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	95.026	100	0.95
rapF	Bacillus subtilis subsp. subtilis str. 168	56.316	99.476	0.56