Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   JX000_RS01030 Genome accession   NZ_CP070964
Coordinates   221159..222055 (+) Length   298 a.a.
NCBI ID   WP_145506399.1    Uniprot ID   -
Organism   Staphylococcus sp. SB1-57     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 216159..227055
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JX000_RS01005 (JX000_01005) - 216773..218236 (+) 1464 WP_206140783.1 poly-gamma-glutamate hydrolase family protein -
  JX000_RS01010 (JX000_01010) - 218415..218516 (+) 102 WP_015364644.1 SE2200 family small protein -
  JX000_RS01015 (JX000_01015) - 218599..220053 (-) 1455 WP_145506402.1 alkaline phosphatase -
  JX000_RS01020 (JX000_01020) - 220308..220466 (+) 159 WP_002452059.1 hypothetical protein -
  JX000_RS01025 (JX000_01025) braR 220488..221153 (+) 666 WP_075778257.1 response regulator transcription factor Regulator
  JX000_RS01030 (JX000_01030) braS 221159..222055 (+) 897 WP_145506399.1 sensor histidine kinase Regulator
  JX000_RS01035 (JX000_01035) - 222159..222905 (+) 747 WP_075778255.1 ABC transporter ATP-binding protein -
  JX000_RS01040 (JX000_01040) - 222923..224938 (+) 2016 WP_241004994.1 ABC transporter permease -
  JX000_RS01045 (JX000_01045) - 225039..225884 (+) 846 WP_145506393.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34428.02 Da        Isoelectric Point: 5.9632

>NTDB_id=541590 JX000_RS01030 WP_145506399.1 221159..222055(+) (braS) [Staphylococcus sp. SB1-57]
MLLTFIKSIKNEIAIVTFISLLFVLIFFVFSLPKSALILGVAIILFIMCIYWWISYLGFQKEERLKEKVVSLEEELFEMK
NKQIEYRKDVESYFLTWVHQIKTPITASQLLLERNEPNVVNQVRQEIVQIDNYTRLALSYLKLLNEASDMTITEVTIDDL
IKPLIMKYRIHFIEQHTKIHYQSIDNSVLTDAQWTSILIEQILNNALKYARGKDIWIDFDSTSQQLCIKDNGIGISQADL
PKIFDKGYSGYNGSLNESSSGIGLFIVKHIAQHLNLNVEVTSELNKGTQFTISFPMQS

Nucleotide


Download         Length: 897 bp        

>NTDB_id=541590 JX000_RS01030 WP_145506399.1 221159..222055(+) (braS) [Staphylococcus sp. SB1-57]
ATGTTACTAACGTTTATTAAATCAATTAAAAATGAAATAGCGATTGTTACTTTCATATCCTTACTATTTGTACTCATTTT
CTTCGTTTTTTCACTCCCTAAAAGTGCGTTAATACTAGGTGTAGCAATCATTTTATTTATTATGTGTATTTATTGGTGGA
TCAGTTATTTAGGTTTTCAAAAAGAAGAAAGACTTAAAGAAAAAGTAGTGTCACTCGAAGAAGAACTATTTGAAATGAAA
AACAAGCAAATTGAATATCGTAAAGATGTTGAAAGTTATTTCTTAACCTGGGTACATCAAATCAAAACGCCTATCACTGC
ATCGCAACTATTACTAGAGCGTAATGAACCTAATGTTGTCAATCAAGTGAGACAAGAAATTGTACAAATTGATAATTATA
CCCGCTTAGCACTCAGTTATTTAAAACTACTTAATGAAGCGTCTGATATGACAATCACCGAGGTGACTATAGATGATTTA
ATTAAACCCTTAATCATGAAATATCGTATTCACTTTATAGAACAACACACTAAAATTCATTACCAATCTATTGATAATAG
CGTCTTAACAGATGCACAATGGACTTCAATATTGATAGAACAGATACTAAATAATGCATTAAAGTATGCACGTGGAAAAG
ATATATGGATTGACTTTGATTCAACTTCTCAACAATTATGTATTAAAGATAACGGTATTGGTATTAGCCAAGCAGACTTG
CCGAAAATCTTTGACAAAGGATATTCTGGTTACAATGGTAGCCTTAATGAATCCTCAAGTGGCATTGGATTGTTTATCGT
TAAACATATTGCGCAACATCTGAATTTAAATGTTGAAGTGACATCAGAATTGAATAAAGGTACACAATTTACAATTAGCT
TTCCAATGCAAAGCTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(198-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

62.457

98.322

0.614