Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BTB_RS21550 | Genome accession | NC_018877 |
| Coordinates | 4247334..4248377 (-) | Length | 347 a.a. |
| NCBI ID | WP_001013177.1 | Uniprot ID | - |
| Organism | Bacillus thuringiensis Bt407 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4242334..4253377
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BTB_RS21505 (BTB_c43750) | - | 4242768..4242968 (-) | 201 | WP_000106083.1 | YqzE family protein | - |
| BTB_RS21510 (BTB_c43760) | aroK | 4243007..4243504 (-) | 498 | WP_000836649.1 | shikimate kinase AroK | - |
| BTB_RS21515 (BTB_c43770) | - | 4243620..4244270 (-) | 651 | WP_000183853.1 | 2OG-Fe(II) oxygenase | - |
| BTB_RS21520 (BTB_c43780) | comGG | 4244444..4244815 (-) | 372 | WP_001214374.1 | competence type IV pilus minor pilin ComGG | - |
| BTB_RS21525 (BTB_c43790) | comGF | 4244812..4245282 (-) | 471 | WP_000923097.1 | competence type IV pilus minor pilin ComGF | - |
| BTB_RS21530 (BTB_c43800) | - | 4245252..4245554 (-) | 303 | WP_000829462.1 | hypothetical protein | - |
| BTB_RS21535 (BTB_c43810) | comGD | 4245547..4246002 (-) | 456 | WP_002094140.1 | competence type IV pilus minor pilin ComGD | - |
| BTB_RS21540 (BTB_c43820) | comGC | 4245999..4246298 (-) | 300 | WP_001243321.1 | competence type IV pilus major pilin ComGC | - |
| BTB_RS21545 (BTB_c43830) | comGB | 4246310..4247341 (-) | 1032 | WP_000475180.1 | competence type IV pilus assembly protein ComGB | - |
| BTB_RS21550 (BTB_c43840) | comGA | 4247334..4248377 (-) | 1044 | WP_001013177.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BTB_RS21555 (BTB_c43850) | - | 4248583..4249278 (+) | 696 | WP_000434124.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| BTB_RS21560 (BTB_c43860) | - | 4249405..4249647 (+) | 243 | WP_000375619.1 | DUF2626 domain-containing protein | - |
| BTB_RS21565 (BTB_c43870) | - | 4249755..4251149 (+) | 1395 | WP_001094344.1 | L-cystine transporter | - |
| BTB_RS35430 | - | 4251229..4251621 (-) | 393 | Protein_4288 | hypothetical protein | - |
| BTB_RS21575 (BTB_c43890) | - | 4251709..4251924 (-) | 216 | WP_001008326.1 | DUF3912 family protein | - |
| BTB_RS21580 (BTB_c43900) | - | 4252178..4252489 (+) | 312 | WP_001093240.1 | hypothetical protein | - |
| BTB_RS21585 (BTB_c43910) | - | 4252524..4253012 (-) | 489 | WP_000764263.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39177.60 Da Isoelectric Point: 8.8944
>NTDB_id=54147 BTB_RS21550 WP_001013177.1 4247334..4248377(-) (comGA) [Bacillus thuringiensis Bt407]
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRHCIKKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGYELKQALKEADGEC
VTYKHETLESSIRKGYALGFLEDDVYV
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRHCIKKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGYELKQALKEADGEC
VTYKHETLESSIRKGYALGFLEDDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=54147 BTB_RS21550 WP_001013177.1 4247334..4248377(-) (comGA) [Bacillus thuringiensis Bt407]
ATGAATGGGATTGAAATTTTTGCGAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACATTGTATTAAAAAGGAGTTTGGAG
AAAAACTTGTCTCACATTTTAAATTTTTAGCATCTATGGACATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTGCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGCTACTCGTGTTTACTGGACCGACTGGTTCTGGGAAGACAACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGTGATGAAGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTCATGACAACGTTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTGCTATATGGATATGAGTTAAAACAAGCGCTTAAAGAAGCAGATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATAAGAAAAGGATATGCTTTAGGTTTTTTAGAAGATGATGTTTATGT
TTAA
ATGAATGGGATTGAAATTTTTGCGAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACATTGTATTAAAAAGGAGTTTGGAG
AAAAACTTGTCTCACATTTTAAATTTTTAGCATCTATGGACATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTGCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGCTACTCGTGTTTACTGGACCGACTGGTTCTGGGAAGACAACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGTGATGAAGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTCATGACAACGTTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTGCTATATGGATATGAGTTAAAACAAGCGCTTAAAGAAGCAGATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATAAGAAAAGGATATGCTTTAGGTTTTTTAGAAGATGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
56.196 |
100 |
0.562 |
| pilB | Haemophilus influenzae 86-028NP |
39.752 |
92.795 |
0.369 |