Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   JW886_RS08430 Genome accession   NZ_CP070872
Coordinates   1702692..1703393 (-) Length   233 a.a.
NCBI ID   WP_075525243.1    Uniprot ID   A0AA45KFS4
Organism   Lactococcus taiwanensis strain K_LL004     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1697692..1708393
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JW886_RS08410 (JW886_08410) - 1697844..1699064 (-) 1221 WP_205871845.1 cysteine desulfurase -
  JW886_RS08415 (JW886_08415) sufD 1699064..1700320 (-) 1257 WP_205871846.1 Fe-S cluster assembly protein SufD -
  JW886_RS08420 (JW886_08420) sufC 1700459..1701229 (-) 771 WP_205871847.1 Fe-S cluster assembly ATPase SufC -
  JW886_RS08425 (JW886_08425) - 1701370..1702689 (-) 1320 WP_205871849.1 MraY family glycosyltransferase -
  JW886_RS08430 (JW886_08430) mecA 1702692..1703393 (-) 702 WP_075525243.1 adaptor protein MecA Regulator
  JW886_RS08435 (JW886_08435) - 1703528..1704262 (-) 735 WP_075525244.1 amino acid ABC transporter ATP-binding protein -
  JW886_RS08440 (JW886_08440) - 1704262..1704948 (-) 687 WP_205871850.1 amino acid ABC transporter permease -
  JW886_RS08445 (JW886_08445) - 1705082..1706005 (-) 924 WP_205272080.1 diacylglycerol/lipid kinase family protein -

Sequence

Protein


Download         Length: 233 a.a.        Molecular weight: 27015.28 Da        Isoelectric Point: 4.0679

>NTDB_id=541224 JW886_RS08430 WP_075525243.1 1702692..1703393(-) (mecA) [Lactococcus taiwanensis strain K_LL004]
MKFEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAL
LNEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLELPGSQKEETDQEPDFIYYSVRYDDMMSALAGVKN
VKFADEESEFYRYEGDFYLVVLDNQKAKGKMHVESTRARMMEYGEASKISREFLQEYGECLIATRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=541224 JW886_RS08430 WP_075525243.1 1702692..1703393(-) (mecA) [Lactococcus taiwanensis strain K_LL004]
ATGAAATTTGAAGATATCAATGAAAACACGATAAAAATTACCCTCTCTTTCGATGACTTAACAGATTATGATATTAAATT
ATCAGACTTTTTTGGTAACCAAGAAGTCATTGAACAGTTCTTCTATGAATTAGTAGATGAACTGGGGTTGGAAAACCGTT
TTGGTAATGTAGGGATGTTGACTTTCCAAATTCAACCTTTCCCACAAGGGGTACATATGATTGTACACGAAGAAGCGTTG
TTGAATGAGGGAGGTGAAATCCCTGATGACCCAGAAGAATTTGAAGAACTCATGACAGGTTTTTATAATAAACTTAATGA
AATAGGTGCAGATATGGCGCGTGAGCGTGGAATTACAGATTTCAAACCAGGCTTGGAACTTCCAGGTTCGCAAAAGGAAG
AAACAGACCAAGAACCTGATTTTATCTATTATTCTGTTCGGTATGACGACATGATGTCAGCGCTCGCGGGTGTTAAGAAC
GTTAAGTTTGCTGATGAAGAATCTGAGTTTTATCGCTATGAGGGTGATTTTTATTTAGTAGTTTTAGATAATCAAAAAGC
CAAAGGGAAGATGCATGTAGAAAGTACGCGTGCTCGAATGATGGAATACGGTGAAGCTTCAAAAATAAGCCGAGAATTTT
TGCAGGAGTATGGGGAGTGTTTGATTGCAACGCGCGCTTTAGACGTTCTTAGAAAAATTTGA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. cremoris KW2

91.845

100

0.918
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

90.558

100

0.906