Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LGV82_RS14650 Genome accession   NZ_CP086104
Coordinates   3112871..3113338 (-) Length   155 a.a.
NCBI ID   WP_016723446.1    Uniprot ID   -
Organism   Ralstonia pseudosolanacearum strain RS650     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3107871..3118338
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LGV82_RS14635 (LGV82_14625) - 3109390..3111621 (-) 2232 WP_011000626.1 methyl-accepting chemotaxis protein -
  LGV82_RS14640 (LGV82_14630) - 3111867..3112412 (-) 546 WP_011000625.1 chemotaxis protein CheW -
  LGV82_RS14645 (LGV82_14635) pilH 3112471..3112839 (-) 369 WP_003269243.1 response regulator Machinery gene
  LGV82_RS14650 (LGV82_14640) pilG 3112871..3113338 (-) 468 WP_016723446.1 response regulator Regulator
  LGV82_RS14655 (LGV82_14645) - 3113629..3113811 (-) 183 WP_003261842.1 rubredoxin -
  LGV82_RS14660 (LGV82_14650) hemL 3114023..3115324 (+) 1302 WP_011000623.1 glutamate-1-semialdehyde 2,1-aminomutase -
  LGV82_RS14665 (LGV82_14655) dapA 3115427..3116341 (-) 915 WP_071507572.1 4-hydroxy-tetrahydrodipicolinate synthase -
  LGV82_RS14670 (LGV82_14660) - 3116722..3117348 (+) 627 WP_016723449.1 LemA family protein -
  LGV82_RS14675 (LGV82_14665) - 3117361..3118215 (+) 855 WP_071507573.1 YgcG family protein -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 16767.51 Da        Isoelectric Point: 8.2887

>NTDB_id=540378 LGV82_RS14650 WP_016723446.1 3112871..3113338(-) (pilG) [Ralstonia pseudosolanacearum strain RS650]
MVAQRENMMQSARVEQLTNSQPLASSLAGRKVLVIDDSSTIRRTAQIFLSKVDCQVVLAEDGFDALAKLGDFKPDIVFCD
ILMPKLDGYLTCSLIKKSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSREALLEAVQAHLPAAAGAAQ

Nucleotide


Download         Length: 468 bp        

>NTDB_id=540378 LGV82_RS14650 WP_016723446.1 3112871..3113338(-) (pilG) [Ralstonia pseudosolanacearum strain RS650]
GTGGTCGCGCAACGCGAGAACATGATGCAATCCGCGCGGGTGGAACAACTGACCAATTCCCAACCGCTGGCGAGTTCGCT
TGCCGGCCGTAAAGTGCTGGTGATCGACGATTCCAGTACCATCCGCCGTACCGCGCAGATTTTCCTGTCCAAGGTCGATT
GCCAGGTCGTGCTGGCCGAAGACGGGTTCGATGCGCTGGCCAAGCTGGGTGACTTCAAGCCGGACATCGTCTTTTGCGAC
ATCCTGATGCCCAAGCTGGACGGTTACCTGACCTGCTCACTGATCAAGAAAAGCCCGAAGTTTCATGCCACGCCCGTGGT
CATGCTGTCGTCGCGCGACGGGGTGTTCGACCGTGCGCGCGGCAAGCTGGTCGGGGCGGTGGACCACCTTGCCAAGCCTT
TCTCGCGGGAAGCGCTGCTGGAGGCGGTCCAGGCGCATCTGCCGGCAGCCGCTGGCGCCGCGCAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(32-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

54.622

76.774

0.419