Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   JQX68_RS02160 Genome accession   NZ_CP070483
Coordinates   430854..431804 (+) Length   316 a.a.
NCBI ID   WP_069148952.1    Uniprot ID   -
Organism   Bacillus sp. LJBS06     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 425854..436804
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JQX68_RS02135 (JQX68_02135) yclK 425916..427337 (+) 1422 WP_205440501.1 two-component system sensor histidine kinase YclK -
  JQX68_RS02140 (JQX68_02140) rapC 427500..428648 (+) 1149 WP_014662770.1 response regulator aspartate phosphatase RapC Regulator
  JQX68_RS02145 (JQX68_02145) phrC 428632..428754 (+) 123 WP_014662771.1 phosphatase RapC inhibitor PhrC Regulator
  JQX68_RS02150 (JQX68_02150) - 428852..428962 (-) 111 WP_040084173.1 YjcZ family sporulation protein -
  JQX68_RS02155 (JQX68_02155) - 429105..430469 (-) 1365 WP_136654856.1 aspartate kinase -
  JQX68_RS02160 (JQX68_02160) ceuB 430854..431804 (+) 951 WP_069148952.1 petrobactin ABC transporter permease YclN Machinery gene
  JQX68_RS02165 (JQX68_02165) yclO 431797..432744 (+) 948 WP_040084169.1 petrobactin ABC transporter permease YclO -
  JQX68_RS02170 (JQX68_02170) yclP 432738..433496 (+) 759 WP_014662775.1 petrobactin ABC transporter ATP-binding protein YclP -
  JQX68_RS02175 (JQX68_02175) yclQ 433518..434471 (+) 954 WP_014662776.1 petrobactin ABC transporter substrate-binding protein YclQ -
  JQX68_RS02180 (JQX68_02180) - 434519..435937 (-) 1419 WP_069839858.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34873.25 Da        Isoelectric Point: 9.9364

>NTDB_id=539984 JQX68_RS02160 WP_069148952.1 430854..431804(+) (ceuB) [Bacillus sp. LJBS06]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFSLAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=539984 JQX68_RS02160 WP_069148952.1 430854..431804(+) (ceuB) [Bacillus sp. LJBS06]
ATGAAGCTACGTTATTTATTTATTCTACTTATCATATTAGCCGTCACATCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTAATCAGCATTGTCA
TCGCGGGCTTAAGCATGAGCATCTGCGGCTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCTCGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTTCCCTAGCAGGCAACTTCCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACTTTTATCGCGTATAAATATGACTTGATC
CAGAACGTGTCATCATGGCTTCAGGGAGACTTCTCCTTAGTCGTGAAAGGGAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGAGAAAGCTTTTCTGTCAATCTCGGCC
TAAAATACAAGCGGGTAGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTATTGGGAGCGGTTTTTGTGCTGTTTTGCGATATATTGGGCAGAGTTATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522