Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   GGS_RS08515 Genome accession   NC_018712
Coordinates   1744479..1745204 (-) Length   241 a.a.
NCBI ID   WP_003057032.1    Uniprot ID   A0A9X5LWD8
Organism   Streptococcus dysgalactiae subsp. equisimilis RE378     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1739479..1750204
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GGS_RS08485 (GGS_1611) nusA 1739673..1740830 (-) 1158 WP_003057051.1 transcription termination factor NusA -
  GGS_RS08490 (GGS_1612) rimP 1740973..1741467 (-) 495 WP_042357979.1 ribosome maturation factor RimP -
  GGS_RS08500 (GGS_1614) trmB 1741951..1742586 (-) 636 WP_003052470.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  GGS_RS08505 (GGS_1615) - 1742586..1743377 (-) 792 WP_003052472.1 cell cycle regulator CcrZ -
  GGS_RS08510 (GGS_1616) - 1743442..1744476 (-) 1035 WP_015017341.1 ABC transporter permease -
  GGS_RS08515 (GGS_1617) pptA 1744479..1745204 (-) 726 WP_003057032.1 ABC transporter ATP-binding protein Regulator
  GGS_RS08520 (GGS_1618) - 1745276..1745695 (+) 420 WP_003057067.1 HIT family protein -
  GGS_RS08525 (GGS_1619) - 1745692..1746021 (+) 330 WP_003057072.1 hypothetical protein -
  GGS_RS08530 (GGS_1620) - 1746179..1747447 (-) 1269 WP_042357980.1 LCP family protein -
  GGS_RS08535 (GGS_1621) - 1747459..1747980 (-) 522 WP_003057063.1 GNAT family N-acetyltransferase -
  GGS_RS08540 (GGS_1622) tsaE 1747973..1748416 (-) 444 WP_041789229.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  GGS_RS08545 (GGS_1623) - 1748593..1750053 (-) 1461 WP_003057030.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26416.65 Da        Isoelectric Point: 4.6450

>NTDB_id=53974 GGS_RS08515 WP_003057032.1 1744479..1745204(-) (pptA) [Streptococcus dysgalactiae subsp. equisimilis RE378]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYQGEISIDGLTLTADPAAYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAEPFLKMFRLADKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLELEKGKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLADLQDAFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=53974 GGS_RS08515 WP_003057032.1 1744479..1745204(-) (pptA) [Streptococcus dysgalactiae subsp. equisimilis RE378]
ATGTTAAACATTGAAAATCTAACGGGGGGTTACCTCAATATTCCCGTTTTAAAAGAGGTCTCATTTTCTGTTGGCAATGG
TGAATTAGTTGGGTTGATAGGCTTAAATGGAGCTGGAAAATCAACAACTATCAATGAAATTATTGGTTTTTTAAAACCTT
ATCAGGGAGAAATTTCGATTGATGGACTAACCTTGACTGCAGATCCAGCTGCCTATCGTAAGAAAATTGGATTTATCCCA
GAGACACCTAGCCTCTATGAAGAATTAACTTTGGCAGAGCATATTAATACTGTGGCTATGGCCTATGATATTGATGTGGA
ATTGGCACAAAAACGAGCAGAACCGTTTTTAAAGATGTTCCGCTTAGCTGATAAATTAGATTGGTTTCCTGTTCATTTTT
CAAAAGGCATGAAGCAAAAAGTCATGATTATCTGTGCTTTTGTGATTGATCCAAGTCTGTTTATCCTTGACGAGCCATTT
TTAGGATTAGACCCGTTGGCTATCTCAGACTTGATTCAGACTTTGGAGCTTGAAAAAGGCAAAGGCAAATCGATTTTAAT
GAGTACTCATGTGCTTGACTCTGCTGAGAAAATGTGTGATCGTTTTGTCATTCTGCATCATGGTCAAGTACGGGCTCAGG
GAACGCTTGCTGACTTGCAGGATGCCTTTGGTGATGCTTCTGCTAGCCTTAACGATATTTACCTGGCATTGACAAAAGAG
GGCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

99.17

0.747
  pptA Streptococcus thermophilus LMD-9

74.477

99.17

0.739

Multiple sequence alignment