Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   JVB21_RS08785 Genome accession   NZ_CP070381
Coordinates   1758472..1759755 (+) Length   427 a.a.
NCBI ID   WP_205271934.1    Uniprot ID   -
Organism   Lactococcus taiwanensis strain K_LL001     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1753472..1764755
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JVB21_RS08760 (JVB21_08760) rlmH 1754798..1755277 (+) 480 WP_075525581.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  JVB21_RS08765 (JVB21_08765) - 1755295..1756005 (+) 711 WP_200407585.1 DNA alkylation repair protein -
  JVB21_RS08770 (JVB21_08770) yajC 1756087..1756413 (+) 327 WP_205271933.1 preprotein translocase subunit YajC -
  JVB21_RS08775 (JVB21_08775) - 1756915..1757649 (+) 735 WP_075525583.1 isoprenyl transferase -
  JVB21_RS08780 (JVB21_08780) - 1757649..1758452 (+) 804 WP_075525584.1 phosphatidate cytidylyltransferase -
  JVB21_RS08785 (JVB21_08785) eeP 1758472..1759755 (+) 1284 WP_205271934.1 RIP metalloprotease RseP Regulator
  JVB21_RS08790 (JVB21_08790) - 1759817..1761670 (+) 1854 WP_200407580.1 proline--tRNA ligase -
  JVB21_RS10240 - 1761924..1762448 (+) 525 Protein_1692 PolC-type DNA polymerase III N-terminal domain-containing protein -

Sequence


Protein


Download         Length: 427 a.a.        Molecular weight: 46151.54 Da        Isoelectric Point: 6.1801

>NTDB_id=539560 JVB21_RS08785 WP_205271934.1 1758472..1759755(+) (eeP) [Lactococcus taiwanensis strain K_LL001]
MIETLVTFIIIFGIIVAIHEYGHLWWAKRAGILVREYAIGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLAVSIKEKQHPADTQSSEEVTRINLSERVELDQAVPMLITDYDFEEALFIEGEVFGEIKRYPVNHDATIIEEDG
TEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSPTNAIGQVEKGTPAYQAGLKAGDKIEAVN
GTKTANWNEVVTEISGSEGKKLDLAIERKGSSQSISVTPQKIDGTYRVGIMQTVKTGVVDKITGGFVQAGRAATAIFQAL
GNLLARPSLDKLGGPVAIYQLSGEAARAGLPSIIYLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKESI
ITLVGVVFMAVLFIAVTWNDILRAFVH

Nucleotide


Download         Length: 1284 bp        

>NTDB_id=539560 JVB21_RS08785 WP_205271934.1 1758472..1759755(+) (eeP) [Lactococcus taiwanensis strain K_LL001]
TTGATAGAAACTTTGGTTACTTTTATTATCATTTTCGGTATCATAGTTGCCATTCATGAGTATGGGCACCTTTGGTGGGC
CAAGCGTGCAGGTATTTTAGTGCGTGAGTATGCGATTGGAATGGGACCAAAAATCTTTGCACATCAAGCAAAAGACGGAA
CCCTCTACACCATCCGAATTCTCCCTCTGGGAGGCTATGTTCGCTTAGCGGGTTGGGGTGATGATAAGACGGAAATTAAA
AAGGGACAAGCTGCGAGTCTTGCTGTCAGTATAAAAGAAAAACAACATCCTGCTGATACACAGAGCAGTGAGGAGGTTAC
GCGAATTAACCTTTCTGAACGTGTGGAGCTTGATCAAGCTGTTCCCATGCTCATCACAGATTATGATTTTGAAGAAGCGC
TGTTCATCGAAGGCGAAGTATTTGGAGAAATCAAGCGCTATCCTGTAAATCATGATGCCACTATTATTGAAGAAGATGGA
ACGGAGGTACGTATTGCTCCGCTTGATGTTCAATATCAATCGGCAGGTGTCTTTCATAAAATGCTTACCAACTTTGGTGG
GCCACTCAATAATTTTATTTTAGGAATTATTGCCTTTATTGTCTTAACTTTTGTCCAAGGAGGAGTCCCTTCACCAACCA
ATGCTATTGGTCAGGTTGAAAAAGGAACCCCAGCCTACCAAGCAGGTCTAAAAGCTGGCGACAAAATCGAAGCAGTGAAT
GGAACAAAAACTGCAAACTGGAATGAGGTGGTTACAGAAATCTCAGGTTCAGAAGGTAAAAAACTTGATTTGGCGATTGA
GCGAAAAGGTTCGAGTCAATCCATCAGCGTGACCCCTCAAAAAATAGACGGGACTTATCGTGTTGGGATTATGCAAACGG
TCAAAACAGGAGTAGTGGATAAAATAACAGGTGGTTTCGTTCAAGCTGGACGCGCAGCAACTGCTATTTTCCAAGCACTT
GGGAACCTGCTCGCACGACCGAGCCTTGACAAATTGGGAGGACCCGTTGCAATTTATCAACTGAGTGGCGAAGCTGCTCG
TGCAGGACTTCCTTCTATCATCTATCTTTTAGCCATGCTTTCAATTAACTTGGGTATTGTTAACCTTTTTCCCATTCCCG
TATTGGATGGAGGAAAGATTGTCCTGAATATTATTGAAGCAATCCGAGGCAAGGCGTTGTCGCAGGAGAAAGAGTCTATT
ATTACCCTTGTAGGTGTCGTTTTTATGGCAGTGCTCTTTATAGCGGTCACTTGGAATGACATTCTCCGTGCCTTTGTCCA
TTAA

Domains


Predicted by InterproScan.

(217-268)

(7-412)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.148

100

0.567

  eeP Streptococcus thermophilus LMD-9

55.916

100

0.564