Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   JVB21_RS00220 Genome accession   NZ_CP070381
Coordinates   56022..56723 (+) Length   233 a.a.
NCBI ID   WP_075525243.1    Uniprot ID   A0AA45KFS4
Organism   Lactococcus taiwanensis strain K_LL001     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 51022..61723
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JVB21_RS00205 (JVB21_00205) - 53410..54333 (+) 924 WP_205272080.1 diacylglycerol/lipid kinase family protein -
  JVB21_RS00210 (JVB21_00210) - 54467..55153 (+) 687 WP_200407412.1 amino acid ABC transporter permease -
  JVB21_RS00215 (JVB21_00215) - 55153..55887 (+) 735 WP_075525244.1 amino acid ABC transporter ATP-binding protein -
  JVB21_RS00220 (JVB21_00220) mecA 56022..56723 (+) 702 WP_075525243.1 adaptor protein MecA Regulator
  JVB21_RS00225 (JVB21_00225) - 56726..58045 (+) 1320 WP_205272081.1 MraY family glycosyltransferase -
  JVB21_RS00230 (JVB21_00230) sufC 58186..58956 (+) 771 WP_075525241.1 Fe-S cluster assembly ATPase SufC -
  JVB21_RS00235 (JVB21_00235) sufD 59095..60351 (+) 1257 WP_205272082.1 Fe-S cluster assembly protein SufD -
  JVB21_RS00240 (JVB21_00240) - 60351..61571 (+) 1221 WP_205272083.1 cysteine desulfurase -
  JVB21_RS00245 (JVB21_00245) - 61564..61722 (+) 159 WP_200407407.1 hypothetical protein -

Sequence

Protein


Download         Length: 233 a.a.        Molecular weight: 27015.28 Da        Isoelectric Point: 4.0679

>NTDB_id=539528 JVB21_RS00220 WP_075525243.1 56022..56723(+) (mecA) [Lactococcus taiwanensis strain K_LL001]
MKFEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAL
LNEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLELPGSQKEETDQEPDFIYYSVRYDDMMSALAGVKN
VKFADEESEFYRYEGDFYLVVLDNQKAKGKMHVESTRARMMEYGEASKISREFLQEYGECLIATRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=539528 JVB21_RS00220 WP_075525243.1 56022..56723(+) (mecA) [Lactococcus taiwanensis strain K_LL001]
ATGAAATTTGAAGATATCAATGAAAACACGATAAAAATTACCCTCTCTTTCGATGACTTAACAGATTATGATATTAAATT
ATCAGACTTTTTTGGTAACCAAGAAGTCATTGAACAGTTCTTCTATGAATTAGTAGATGAACTGGGGTTAGAAAACCGTT
TTGGTAATGTAGGGATGTTGACTTTCCAAATTCAACCTTTCCCACAAGGGGTACATATGATTGTACACGAAGAAGCGTTG
TTGAATGAGGGAGGTGAAATCCCTGATGACCCAGAAGAATTTGAAGAACTCATGACAGGTTTTTATAATAAACTTAATGA
AATAGGTGCAGATATGGCGCGTGAGCGTGGAATTACAGATTTTAAACCAGGCTTGGAACTTCCAGGTTCGCAAAAGGAAG
AAACAGACCAAGAACCTGATTTTATCTATTATTCTGTTCGGTATGACGACATGATGTCAGCGCTCGCGGGTGTTAAGAAC
GTTAAGTTTGCTGATGAAGAATCTGAGTTTTATCGCTATGAGGGTGATTTTTATTTGGTAGTTTTAGATAATCAAAAAGC
CAAAGGTAAGATGCATGTGGAAAGTACGCGTGCTCGAATGATGGAATACGGTGAAGCTTCAAAAATAAGCCGAGAATTTT
TGCAGGAGTATGGGGAGTGTTTGATTGCAACGCGCGCTTTAGACGTTCTTAGAAAAATTTGA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. cremoris KW2

91.845

100

0.918
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

90.558

100

0.906