Detailed information NTG0539293

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: JVX94_RS08985
• Genome accession: NZ_CP070345
• Coordinates: 1712138..1713100 (-)
• Length: 320 a.a.
• NCBI ID: WP_048238469.1
• Uniprot ID: -
• Organism: Bacillus sp. PDNC022
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1707138..1718100

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JVX94_RS08955 (JVX94_08955)	-	1707300..1708280 (-)	981	WP_205185338.1	ABC transporter ATP-binding protein	-
JVX94_RS08960 (JVX94_08960)	-	1708430..1709233 (-)	804	WP_095408191.1	DUF2268 domain-containing protein	-
JVX94_RS08965 (JVX94_08965)	fabF	1709311..1710552 (-)	1242	WP_034282078.1	beta-ketoacyl-ACP synthase II	-
JVX94_RS08970 (JVX94_08970)	-	1710574..1711512 (-)	939	WP_095408190.1	beta-ketoacyl-ACP synthase III	-
JVX94_RS08975 (JVX94_08975)	-	1711684..1711917 (+)	234	WP_144470147.1	hypothetical protein	-
JVX94_RS08980 (JVX94_08980)	comZ	1711928..1712125 (-)	198	WP_024425054.1	ComZ family protein	Regulator
JVX94_RS08985 (JVX94_08985)	med	1712138..1713100 (-)	963	WP_048238469.1	BMP family ABC transporter substrate-binding protein	Regulator
JVX94_RS08990 (JVX94_08990)	-	1713192..1713767 (-)	576	WP_205185340.1	nad binding enzyme	-
JVX94_RS08995 (JVX94_08995)	-	1713841..1714581 (-)	741	WP_205185342.1	hypothetical protein	-
JVX94_RS09000 (JVX94_09000)	-	1714794..1714988 (+)	195	WP_003211779.1	YjzD family protein	-
JVX94_RS09005 (JVX94_09005)	-	1715103..1716368 (-)	1266	WP_144470143.1	MFS transporter	-
JVX94_RS09010 (JVX94_09010)	-	1716542..1716721 (-)	180	WP_008348517.1	YjzC family protein	-
JVX94_RS09015 (JVX94_09015)	argF	1716824..1717774 (-)	951	WP_205185345.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35653.50 Da
• Isoelectric Point: 5.0003

>NTDB_id=539293 JVX94_RS08985 WP_048238469.1 1712138..1713100(-) (med) [Bacillus sp. PDNC022]
MKYQRLVMIFSFLLLLSACSQAPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPNIQFITVNGNKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDDAFVKDIESDIASYKKTGKLPNEK

Nucleotide

• Length: 963 bp

>NTDB_id=539293 JVX94_RS08985 WP_048238469.1 1712138..1713100(-) (med) [Bacillus sp. PDNC022]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTATTATCTGCCTGCTCGCAGGCTCCTTTAAAAGGAAA
AATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGTGAAATTTTCAACTTGATCAGTGAAGA
TTATCCAAACATACAATTTATTACGGTCAATGGAAACAAGCCTCAGGCGGACAATGTCACAAACGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCTGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGTGAAGTAGACGGCTTTATCAAAGGGGCAAAATATCAAGATGAACATGTACAAGTGTTAGCGGAGTTTGTTGA
AAACTGGGATGATGCTGATAAAGCGGTGGAGCTCTATCAAAAATTAAAAAAGCAGGGCGTAGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGGTATGTCACCGATCAATCC
AACCTCGGCAGCCATACGGTTTTAACGAGCACTGTACAGCATGTTGATAAAGCGTACAGTATCATTGCAAAGAAGTTTAA
TGAAGGCAAGCTAAATGAACAAGGTGAATACTCCTTTGATTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCTCCA
CCATTGACGACGCTTTTGTGAAAGATATTGAAAGTGATATTGCGTCTTACAAAAAAACAGGCAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (28-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	64.537	97.813	0.631